Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00461 CTGAAACCCATCTCTATCTCTCGGATTCTTGACGCAACCGAGCAAGGGAAACTAGCCCTCCGATCCTCCGAGAACATTCTATAGCACTGTAGAGTTCTTGTAGAAACGTTTAGCTCCATCACTGTAAAGTCTGTAACTTGTACAGGAACCTCAACTAAAAGAAACCCGATTTCATGGAGTTGTACGGACGCAATCCGGCGAGGAATGGGTCGCAATCGGGTAATCAATCTGAATGGCGCCCAGCAAGTGGCGAGACTGGCCTCGAAGAATCGATGTGGCACTTGGCACTGAGTAGCAGCGAATCATACCCGGAGCGACCCGGCGTACCCAATTGTGTGTATTACATGCGAACTGGGTTTTGTGGATATGGTAGCAGGTGCCGTTACAATCATCCTCGTGATCGTGCTGCGGTTGCTGCAGCTGTAATAGCTACAGGGGAGTACCCAGAACGGGTGGGGGAACCACCATGTCAGTATTATTTAAAAACTGGAACCTGTAAATTTGGTGCATCCTGTAAATTCCATCATCCCAAACATGGAGGTGGATCTTTAAGCCAAGCTCCACAAAATATTTATGGATACCCGTTACGGCCGGGCGAGAAAGAATGCTCCTACTATTTGAAAACGGGGCAGTGCAAATTTGGTATAACTTGTAAATTCCATCATCCTCAACCTGCTGGCACATCAGGTCCAGCATCTGCACCTCAATTTTATCAACAGGTGCAGTCCCCTACAGTTCCTCCGTCTGAACAGTATGGAGGAGCATCCTCCAGCTTGAGAGTGGCTAGGCCTCCAATGTTGCCCGGTTCATATGTGCAAGGGGCATATGGTCCTGTGCTTCTTTCCCCAGGGGTTGTTCCATTTTCAGGATGGAATCCTTACTCGGCACCTGTAAGCCCCGTTTTGTCTCCTGGTGCTCAACCTGCTGTCGGAGGTACTTCTCTTTATGGAATGACCCAGCTGTCTTCAACAACATCAGCATTTGCTAGACCATATACTCCTCTGCCTTCTTCCACTTGGCCTTCTGGTAGTAGCCCAAAGGAACCAGTTTTTCCGGAAAGACCTGGTGAACCTGAATGCCAATACTATCTGAGAACAGGGGATTGTAAATTTGGATTAGCATGCCGGTATCATCATCCACGTGATCAGGCTGTGATACGGCCACTTCTGAGCCCCATTGGTCTTCCTTTACGTCCGGGAACACAACCATGTGCATTTTACTTGCAAAATGGGCATTGCAAGTTTGGGTCTACATGCAAATTTGATCATCCTTTGGGGTCGGTGAGATACAGTCCATCAGCATCTTCTCTCATTGATATGCCAGTGACTCCATACCCAGTCGGGTCCTTGCTATCTACCCTAGCTCCTTCAACTACCTCTTCGGAGCTTCGACCTGAATTAATGTCAGGTTCCAAAAAGGAATCCTTTACAGCCAGATTGCCTTCATCTGGAAACGGTTCCAGCAATTCGGTCAGTTTAATTTTTACACAGAGTGGATCTGTCTCACTCACTGATGTGCAACTATCAAGTCAGAGTTCTGCCCCTTTAAGTAGTGGCAGAAGCACTAGTAGATAAAGTGGCAAGATACCTTGTTCAGAAAGCCTCCATTGCTTTCTTTCTGTTTGAAGGCTCATTTGCCAGTCGTGAATTCTTCATCTCATCCTATTTAGTCTGTCCTAGGTACATCTAATCTGATTATATGAAATAAGCT 1710 0.4708 MELYGRNPARNGSQSGNQSEWRPASGETGLEESMWHLALSSSESYPERPGVPNCVYYMRTGFCGYGSRCRYNHPRDRAAVAAAVIATGEYPERVGEPPCQYYLKTGTCKFGASCKFHHPKHGGGSLSQAPQNIYGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGTSGPASAPQFYQQVQSPTVPPSEQYGGASSSLRVARPPMLPGSYVQGAYGPVLLSPGVVPFSGWNPYSAPVSPVLSPGAQPAVGGTSLYGMTQLSSTTSAFARPYTPLPSSTWPSGSSPKEPVFPERPGEPECQYYLRTGDCKFGLACRYHHPRDQAVIRPLLSPIGLPLRPGTQPCAFYLQNGHCKFGSTCKFDHPLGSVRYSPSASSLIDMPVTPYPVGSLLSTLAPSTTSSELRPELMSGSKKESFTARLPSSGNGSSNSVSLIFTQSGSVSLTDVQLSSQSSAPLSSGRSTSR 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00461 466 ProSiteProfiles Zinc finger C3H1-type profile. 93 121 IPR000571 GO:0046872
Bach8g00461 466 Gene3D - 295 378 - -
Bach8g00461 466 Gene3D - 46 123 - -
Bach8g00461 466 PANTHER PROTEIN PHOSPHATASE RELATED 17 386 - -
Bach8g00461 466 MobiDBLite consensus disorder prediction 447 466 - -
Bach8g00461 466 MobiDBLite consensus disorder prediction 1 27 - -
Bach8g00461 466 SUPERFAMILY CCCH zinc finger 96 120 IPR036855 GO:0046872
Bach8g00461 466 SMART c3hfinal6 48 75 IPR000571 GO:0046872
Bach8g00461 466 SMART c3hfinal6 93 120 IPR000571 GO:0046872
Bach8g00461 466 SMART c3hfinal6 139 166 IPR000571 GO:0046872
Bach8g00461 466 SMART c3hfinal6 296 323 IPR000571 GO:0046872
Bach8g00461 466 SMART c3hfinal6 340 367 IPR000571 GO:0046872
Bach8g00461 466 MobiDBLite consensus disorder prediction 398 433 - -
Bach8g00461 466 SUPERFAMILY CCCH zinc finger 52 77 IPR036855 GO:0046872
Bach8g00461 466 ProSiteProfiles Zinc finger C3H1-type profile. 48 76 IPR000571 GO:0046872
Bach8g00461 466 SUPERFAMILY CCCH zinc finger 141 167 IPR036855 GO:0046872
Bach8g00461 466 Gene3D - 124 172 - -
Bach8g00461 466 MobiDBLite consensus disorder prediction 417 433 - -
Bach8g00461 466 SUPERFAMILY CCCH zinc finger 300 325 IPR036855 GO:0046872
Bach8g00461 466 SUPERFAMILY CCCH zinc finger 340 371 IPR036855 GO:0046872
Bach8g00461 466 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 298 323 IPR000571 GO:0046872
Bach8g00461 466 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 341 366 IPR000571 GO:0046872
Bach8g00461 466 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 50 75 IPR000571 GO:0046872
Bach8g00461 466 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 96 120 IPR000571 GO:0046872
Bach8g00461 466 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 141 166 IPR000571 GO:0046872
Bach8g00461 466 MobiDBLite consensus disorder prediction 8 24 - -
Bach8g00461 466 ProSiteProfiles Zinc finger C3H1-type profile. 139 167 IPR000571 GO:0046872
Bach8g00461 466 ProSiteProfiles Zinc finger C3H1-type profile. 340 368 IPR000571 GO:0046872
Bach8g00461 466 ProSiteProfiles Zinc finger C3H1-type profile. 296 324 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00461 Bach-Chr8 2942080 2945564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00461 1 419 C2H2 Transcription Factor Family AT5G18550 53.303 1.85e-138 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach8g00461 zf-CCCH 5.5e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00461 - - gmx:100812475 810.446