Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00454 ATGGATCCGAATGCTGAAGTTATTGCTTTATCACCAACCACATTAATGGCAACAAATAGATTCATATGTGAGATATGCAACAAAGGGTTCCAGAGGGACCAAAACCTTCAGTTGCACCGAAGAGGTCACAATCTTCCGTGGAAACTGAAGCAGAGAACGACCACTGAGGTCAAGAAACGGGTCTACGTATGCCCTGAACCATCATGCGTTCACCATAACCCTGCTCGTGCATTGGGAGACCTCACTGGTATCAAAAAGCATTATAGCAGGAAACATGGCGAGAAGAAATGGAAGTGTGACAAATGCTCCAAAAAATATGCAGTTCAATCTGATTGGAAAGCCCACCAGAAAACCTGTGGTACAAGAGAATATAAATGTGACTGTGGAACCATTTTTTCCAGGAGGGATAGTTTTATCACTCACAGAGCTTTTTGTGATGCATTAACCGAGGAAAATAACCGAGTGAACCAGGGATTGAGCAGTGGTATGCCACCAAACTTGCAAAATCAAATGCCAGATCTTATGCCTATCAGCACCTGTTCCAACATAGCATCTGAATATAGCAACTACGACCCCAAGAACCCCCTAAAAGCCCTGCCCCAAGAACTTGTCCGTATGCCATTCAAGCCCATGAGCATGGGTGGAGGCATGTTCTCGACCAGTTCAGGTTCACTCTTTGGTGGTCCAAAAGGCAATTCCCCCTCCTCTTCTACTCTTCAGCTCAGTTCCAACAGCACCACTGGCCTCAATTACTTCCCAGACAGCAAAAATGGAGGACTAATATCTGGGTCAGCCCACATGTCAGCAACAGCTTTATTACAGAAAGCAGCTCAAATGGGTGCCACTGCAAGCAGTAGCATCAACTCTCCCATGCTGCAGAAAAGCTTTGTTAGTAGCATGGCTGGTCCTGACCCAATTAGACCACCATCATATTCTGGTGCTATGCAGCAGCATAACCCCTCATATGACCACTTCCATCCTCACCCTGATCAATCTGACATGGCTGGGATTAATACAGGTGGAGCATTCAGTAGCCCATTGTTTCAGAAGGGCCCACAAGAACTGTCACAACTGCTTGATCCTGATACTCCAGGACCAACAATGAATGAAATGGGAATGTTCACCCAAATATTCGAAATGGGCAATGACCATAACCGAGGATTAATCAAGAATATGGAACGAGAAGGTGGTAATAGTTCGAGTTTGATCCATGGAAGAGATGCAGCACAAGGGAACCCAATGGGGCAATCAAGGTTTGGAGGGAGTGACATGACGACGGTTCATGACTTTTTGGGCATTGGGGCTTCAAATTCAAGGGCAGGGAATTTGCATGAATCACAACGCCATCAACAACAAAGATTGGAATTGGGAGCAATGAATCAGCAGAAGTTACCACTTATAAATCACTTTTATCATCAGCTTCCACATGGCGATTCAGCTCTGGAGAAATCCATTTGGGATGTGTGA 1467 0.4533 MDPNAEVIALSPTTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTTTEVKKRVYVCPEPSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALTEENNRVNQGLSSGMPPNLQNQMPDLMPISTCSNIASEYSNYDPKNPLKALPQELVRMPFKPMSMGGGMFSTSSGSLFGGPKGNSPSSSTLQLSSNSTTGLNYFPDSKNGGLISGSAHMSATALLQKAAQMGATASSSINSPMLQKSFVSSMAGPDPIRPPSYSGAMQQHNPSYDHFHPHPDQSDMAGINTGGAFSSPLFQKGPQELSQLLDPDTPGPTMNEMGMFTQIFEMGNDHNRGLIKNMEREGGNSSSLIHGRDAAQGNPMGQSRFGGSDMTTVHDFLGIGASNSRAGNLHESQRHQQQRLELGAMNQQKLPLINHFYHQLPHGDSALEKSIWDV 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00454 488 SUPERFAMILY beta-beta-alpha zinc fingers 20 118 IPR036236 -
Bach8g00454 488 ProSitePatterns Zinc finger C2H2 type domain signature. 23 43 IPR013087 -
Bach8g00454 488 Pfam Zinc-finger double-stranded RNA-binding 21 43 IPR022755 -
Bach8g00454 488 FunFam protein indeterminate-domain 12-like 1 68 - -
Bach8g00454 488 Gene3D Classic Zinc Finger 2 67 - -
Bach8g00454 488 Gene3D Classic Zinc Finger 75 155 - -
Bach8g00454 488 ProSiteProfiles Zinc finger C2H2 type domain profile. 21 43 IPR013087 -
Bach8g00454 488 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 2 446 IPR031140 -
Bach8g00454 488 FunFam protein indeterminate-domain 5, chloroplastic-like 75 154 - -
Bach8g00454 488 SMART c2h2final6 97 117 IPR013087 -
Bach8g00454 488 SMART c2h2final6 21 43 IPR013087 -
Bach8g00454 488 SMART c2h2final6 62 92 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00454 Bach-Chr8 2876970 2878884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00454 2 284 IDZ Gene Family AT3G50700 54.754 4.23e-105 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach8g00454 zf-C2H2_jaz 7.1e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00454 - - qsa:O6P43_010738 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00454 8 2876970 2878884 Bach8g00454 8 2876970 2878884 ECH