Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00407 ATATATCTATTTTATTTATTTATTTATTTATATTTCTATTTATTCTCTACTTTTTAAAAAGCAAAGCACTTCTTCTAGCTTCAACTATCGTCTATTTTGCTTCACACTTGTTTCCTATGGATGCAGAAACACACGCAAGGTATGCCCAGAACGGTGAGGTCATGCTCGCCTCTGCCATCCTTCTCTTTTTCATAGCACTCATCATCATTTTCCTTCGAACCTTTGGTCATTTATGCATACGTCAACGCCGCCGCCAATTCCGTCGTAATACGGGTCTCTTTTACCCTGGTTTCATAATTCCTACCTCTTCCTCCATAAGGACCACCACCACAACCACCGCTACTTTTAGTAAGCCACTCGAACTTTCCATTCTTAAATTGCTTCCCACGTTCACTTACTCCTCCGCGAACCATCGCCTGCTGCAGGAGTGCGCCGTCTGCTTATCGGAGTTCGGAGACGACGATGAAGGTCGTGTCCTCCCAAGTTGTAACCACGCCTTCCACTCTCATTGTATAGACACATGGTTCCGCTCTCACTCTAATTGCCCGCTTTGTCGAGCCCCGGTTCGCCCGCCTAAAGTTGGACCTGTTGATACGGTTTCGTCCGACCCGATTCGTTCGTTTTCTGTTTTGGGTGTACAGTCAGAAAGTCAAGCGGGTTGCTCGACTCTTCCTCCACCGATCGGATGCCCAAGAAAGCCGTTAGAGCTGGTAGACATGGTGGGCATAATAGTAGAGTTGCCTTCGGACCCGGAGAAAGGAAGAGCTTGAATGGATGCAGAAACACACGCAAGGTATGCCCAGAACGGTGAGGTCATGCTCGCCTCTGCCATCCTTCTCTTTTTCATAGCACTCATCATCATTTTCCTTCGAACCTTTGGTCATTTATGCATACGTCAACGCCGCCGCCAATTCCGTCGTAATACGGGTCTCTTTTACCCTGGTTTCATAATTCCTACCTCTTCCTCCATAAGGACCACCACCACAACCACCGCTACTTTTAGTAAGCCACTCGAACTTTCCATTCTTAAATTGCTTCCCACGTTCACTTACTCCTCCGCGAACCATCGCCTGCTGCAGGAGTGCGCCGTCTGCTTATCGGAGTTCGGAGACGACGATGAAGGTCGTGTCCTCCCAAGTTGTAACCACGCCTTCCACTCTCATTGTATAGACACATGGTTCCGCTCTCACTCTAATTGCCCGCTTTGTCGAGCCCCGGTTCGCCCGCCTAAAGTTGGACCTGTTGATACGGTTTCGTCCGACCCGATTCGTTCGTTTTCTGTTTTGGGTGTACAGTCAGAAAGTCAAGCGGGTTGCTCGACTCTTCCTCCACCGATCGGATGCCCAAGAAAGCCGTTAGAGCTGGTAGACATGGTGGGCATAATAGTAGAGTTGCCTTCGGACCCGGAGAAAGGAAGAGCTTGAGATGGGCTCGGCCTCGCCCCGGTTCAAAAGTTGAGATCATCGGATTCTTCCCACTGAAAAATAATTTTAGCATATTTTCAGAAGGGGGCCCACGGGAGAAGAACGTGGCGTTTTACATGCTGCTGATTTATGTATACAAACTATTTATTTGGATTCTGTGGAAAG 1589 0.4827 MDAETHARYAQNGEVMLASAILLFFIALIIIFLRTFGHLCIRQRRRQFRRNTGLFYPGFIIPTSSSIRTTTTTTATFSKPLELSILKLLPTFTYSSANHRLLQECAVCLSEFGDDDEGRVLPSCNHAFHSHCIDTWFRSHSNCPLCRAPVRPPKVGPVDTVSSDPIRSFSVLGVQSESQAGCSTLPPPIGCPRKPLELVDMVGIIVELPSDPEKGRA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00407 217 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Bach8g00407 217 CDD RING-H2_EL5-like 104 147 - -
Bach8g00407 217 FunFam E3 ubiquitin-protein ligase ATL6 69 153 - -
Bach8g00407 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 153 IPR013083 -
Bach8g00407 217 Pfam Ring finger domain 104 147 IPR001841 -
Bach8g00407 217 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 9 151 IPR044675 -
Bach8g00407 217 SMART ring_2 105 146 IPR001841 -
Bach8g00407 217 SUPERFAMILY RING/U-box 99 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00407 Bach-Chr8 2624428 2625362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00407 9 151 Rapid Response to Elicitors AT3G16720 39.161 9.01e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00407 - - gmx:102665377 185.267