Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00404 ATGGCTTTCAAGACCTTCTCCCTTCTCACACTTTTGTTTTCAATTCTGCTTTCCATCTTTTCATCGTTATCAATAGCAGATCCTCAAGAAACCATTTGCACCTCCACCTCAAACCCTTCTTATTGCAAAAATGTGCTTGCCAATCAAAATGGTGGAAATATCTACGACTATGGCCGCATTTCTTTTCAAAAATCCTTATCACAGTCCCGCAAGTTCTTGAACTTAGTGGACTCGTACCTTCAATCAAGCTCCTCTTTTTCCCAGCCTCTTGTTCGCGCTCTTGAGGATTGTCGCTTCCTCGCTCAGCAAAACTTGGATTATTTATCAAACACCTTTGGCATTGTGAATAAAACTAGAAATGCTCTTTCTAGTTCACAAGCTGAAGATACCCAAACCTCGCTTAGTGCCGTTTTGACAAACCAGCAGACTTGTTTAGATGGATTAGAGACTGTTGCTTCGGGTTCAAGAGTGAAGAATGAGCTTTCTCTCCCACTCTCTGATGACACTAAGCTTCATAGTCTGTCGCTGGATTTCTTCGTCAAAGGGTGGGTGCCTGCGAAGAAAGTTGCAACATCATGGGCACACAATGGGAGACATTTGGGTTTCCGCAATGGTCGTTTGCCATTGAAGATGTCGAACCGAGTGCGTGCCATTTATGATGCCGCTAGAGGGCGCCACAGGCACGGGAGGAAACTACTTCAGGCTGAGGATGGCGATGAAAGTGTCCTTGTTCAGGATATTGTGGTTGTTTCTCAGGATGGAAGCGGTAGCTTCACCACCATCAACGATGCTATAGCTGCGGCACCCAATAACACTGATGCAACTGATGGCTACTTTCTGATATATATCACCGAGGGTGTGTATCAAGAATATGTGTCCATTGACAAAAAGAAGACTTACTTGATGCTAATCGGAGATGGAATCAATCGGACAACTATCACCGGAGATCGAAATGTTATTGACGGGTTTACAACGTTCAACTCAGCAACACTTGCTGTAGTAGCACCAGGGTTTGTAGCAGTGAACATAACATTCCGTAACACTGCGGGGCCAAGCAAGCACCAAGCCGTTGCAATGAGAAGTGGAGCAGACATGTCCACATTCTATAGTTGCAGCTTCGTAGGGTACCAAGATACCCTCTACACACATTCCAACAGGCAATTCTACAGAGAATGTGATATCTACGGCACCGTTGACTTCATATTCGGAAATGGCGCAGCCGTTTTGCAAAATTGCAATATCTATCCTCGGCTACCCTTGAGTGGCCAATTCAATGCCATCACTGCTCAAGGCCGAACCGACCCGAACCAGAACACTGGCATTTCCATCCAAAACGCTACCATAAGAGCTACTGATGACTTGGCTCCAAATGTTGGTTCTGTGAATACGTACCTTGGGAGGCCATGGAAGCAATACTCGAGGACAGTGTATCTGCAGTCATTCATGGACAGTTTGATAAATCCAGCAGGTTGGCGTGCATGGGATGGTGATTTTGCTCTCACCACGTTGTATTATGCAGAGTACAGTAACAGGGGACCTGGTTCAAGCACTGCCAACCGAGTAACATGGCCTGGTTACCATGTCATCGGTGCGACAGAAGCAGCTAACTTTACAGTGTCTAACTTTGTGGCAGGGGATGGTTGGCTGCCTCAAACTGGAGTCCCATACTCAAGTGGATTAATATAG 1686 0.4591 MAFKTFSLLTLLFSILLSIFSSLSIADPQETICTSTSNPSYCKNVLANQNGGNIYDYGRISFQKSLSQSRKFLNLVDSYLQSSSSFSQPLVRALEDCRFLAQQNLDYLSNTFGIVNKTRNALSSSQAEDTQTSLSAVLTNQQTCLDGLETVASGSRVKNELSLPLSDDTKLHSLSLDFFVKGWVPAKKVATSWAHNGRHLGFRNGRLPLKMSNRVRAIYDAARGRHRHGRKLLQAEDGDESVLVQDIVVVSQDGSGSFTTINDAIAAAPNNTDATDGYFLIYITEGVYQEYVSIDKKKTYLMLIGDGINRTTITGDRNVIDGFTTFNSATLAVVAPGFVAVNITFRNTAGPSKHQAVAMRSGADMSTFYSCSFVGYQDTLYTHSNRQFYRECDIYGTVDFIFGNGAAVLQNCNIYPRLPLSGQFNAITAQGRTDPNQNTGISIQNATIRATDDLAPNVGSVNTYLGRPWKQYSRTVYLQSFMDSLINPAGWRAWDGDFALTTLYYAEYSNRGPGSSTANRVTWPGYHVIGATEAANFTVSNFVAGDGWLPQTGVPYSSGLI 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00404 561 Pfam Plant invertase/pectin methylesterase inhibitor 30 159 IPR006501 GO:0004857
Bach8g00404 561 SUPERFAMILY Pectin lyase-like 245 559 IPR011050 -
Bach8g00404 561 Gene3D - 242 560 IPR012334 -
Bach8g00404 561 PANTHER PECTINESTERASE 20 550 - -
Bach8g00404 561 FunFam Pectinesterase 241 560 - -
Bach8g00404 561 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 181 IPR035513 -
Bach8g00404 561 CDD PMEI-like_3 31 179 - -
Bach8g00404 561 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Bach8g00404 561 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 179 IPR035513 -
Bach8g00404 561 FunFam Pectinesterase 30 181 - -
Bach8g00404 561 Pfam Pectinesterase 248 546 IPR000070 GO:0030599|GO:0042545
Bach8g00404 561 SMART PMEI_2 24 178 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00404 Bach-Chr8 2613618 2615427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00404 1 561 Carbohydrate Esterase AT4G02330 58.276 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00404 K01051 - gmx:100813051 816.224