Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach8g00403 | ATGGCTTCGAAGATCTTTTGTTTTGCTACATTTGCATTGCTTATTCTCCTTTCCTTGCTTGCATTACAAACAAATGCAGACATCTCGCCGGCCACCCCTATTGACCCAAAAACCATTTGCCAGTCCACTCCATATCCATCTTATTGCGAAGCCGTGCTTCCTAAGCAAAATGGTAAAGTCCACGACTTTGGCAAGTTCTCTCTCCAGAAATCCTTGTTTCAGAGCCGTAAGTTCTCCAACTTGGTGAACTCTTATCTTGGTGGCAAGTCCACCTTGTCTGAAAGGACAATTCGTGCATTGGGTGATTGCCAATTTCTCTCTCAACTCAATGTTGAATACTTAACAAGGTGCAATGAGTTCGTGAACAGGGCTACTGAATCTCTCTCTGATTCTGAAGCTGATTATGCCCAAACCTTGCTCAGTGCCATAATAACCAACCAACAGACTTGTTTGGAGGGATTAACCACCACGGCTTCTGATTTAAGCATAAAGAATGGACTTTTCGGCCCACTCTCTGATGACAGTAAGCTCCACAGTCTATCTCTGGCTCTGTTCATAAAGGGTTGGGTGAATAACAAGAGTGCTCCGATCATATGGGATTCCGAAGGATGGCACCCGGGTTTCAGCAATGGCCGATTACCTCTCAAGATGTCAAACAGAACACGGACCATTTATGACTCGGTGAGAGGCAGGAGAAAGCTCAGCGACGACGATGATGACAGTGTTTTGATTAGTGACATTGTGATTGTGAGCCAAGATGGAAGTGGAAACTTCACCACTATAAACGACGCCGTCACTGCAGCTCCAGTCAACTCTAACGGAACCGATGGCTATTACTTGATTTATATCACAGAGGGTGTCTACCAAGAATACGTCTCCATCCCCATAAACAAACCCTATTTGATGATCATCGGAGACGGAATCAACCGTACAATTATCACAGGCAACCACAGTGCTGGTGATGGATGGACAACATTCAATTCAGCCACATTTGGTAAACACACGTTAATTTGGTAA | 1017 | 0.4464 | MASKIFCFATFALLILLSLLALQTNADISPATPIDPKTICQSTPYPSYCEAVLPKQNGKVHDFGKFSLQKSLFQSRKFSNLVNSYLGGKSTLSERTIRALGDCQFLSQLNVEYLTRCNEFVNRATESLSDSEADYAQTLLSAIITNQQTCLEGLTTTASDLSIKNGLFGPLSDDSKLHSLSLALFIKGWVNNKSAPIIWDSEGWHPGFSNGRLPLKMSNRTRTIYDSVRGRRKLSDDDDDSVLISDIVIVSQDGSGNFTTINDAVTAAPVNSNGTDGYYLIYITEGVYQEYVSIPINKPYLMIIGDGINRTIITGNHSAGDGWTTFNSATFGKHTLIW | 338 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach8g00403 | 338 | Pfam | Pectinesterase | 248 | 333 | IPR000070 | GO:0030599|GO:0042545 | |
| Bach8g00403 | 338 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 36 | 187 | IPR035513 | - | |
| Bach8g00403 | 338 | SMART | PMEI_2 | 31 | 184 | IPR006501 | GO:0004857 | |
| Bach8g00403 | 338 | FunFam | Pectinesterase | 37 | 187 | - | - | |
| Bach8g00403 | 338 | Pfam | Plant invertase/pectin methylesterase inhibitor | 37 | 182 | IPR006501 | GO:0004857 | |
| Bach8g00403 | 338 | CDD | PMEI-like_3 | 38 | 189 | - | - | |
| Bach8g00403 | 338 | PANTHER | PECTINESTERASE | 18 | 332 | - | - | |
| Bach8g00403 | 338 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 37 | 185 | IPR035513 | - | |
| Bach8g00403 | 338 | SUPERFAMILY | Pectin lyase-like | 244 | 331 | IPR011050 | - | |
| Bach8g00403 | 338 | Gene3D | - | 242 | 335 | IPR012334 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bach8g00403 | Bach-Chr8 | 2608220 | 2609236 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bach8g00403 | 38 | 332 | Carbohydrate Esterase | AT4G02330 | 51.911 | 6.70e-98 | 299 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bach8g00403 | K01051 | - | qsa:O6P43_007198 | 373.244 |