Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00399 AAACCTACCAAAATCCCTCCCTGCTACCGCTTTATTTCTATTCTCTCATTCTTATTTCCAACGCTCTGCTGGTGGTTTCTTAAGTTGGATTAATCATGTGTGGTGGTGCTATCATTGCTGACTTCATTCCTCGTCACAGGGGTCGCCGCCGTTCCGCTTCCGATATTTGGCCGGATTCATTTGGTAAGCAGAACGATTTCGACTGGGATTATTCTCAATTGGATCAGGAACACTCAGTTCCCCTCAAAAGATCCCAACCTTCCTCAGTTAATGAACAAGTGGAGAAGCCCGTCAAGAGGCAGAGGAAAAACGTTTACAGAGGCATCCGGCAGCGTCCATGGGGTAAATGGGCCGCTGAGATTCGTGATCCCAGGAAAGGGGTTCGAGTTTGGCTTGGTACCTTCAACACCGCCGAAGAAGCTGCTAGGGCCTATGACAGAGAGGCTCGCAAAATCCGTGGCAAGAAGGCCAAAGTAAATTTTCCTAATGAAGACGATGAGTACTCCATTCAAGCTCGTCGTAATCCTCCACCTCCACTCCGACGCCCAAATCCTACTCTCTATCAACACTACGATTCTAATTTGAATGATGTCCCCAAAAGTCTGAATTTGGAATTTGGTTACAATCTGAACCAAGTTGGGTCGATTCCCTCCAATGGTTTCGAGACTATTGGTGCTATGGACATTGACCCAGTTGTTATTTCTGGCGATGAAAATTCTGGAAGTGGTTCAGGGTCAGAGGGTGCTTACTCAACGACGGAATTCATGGGACCGATCCAGAATATAAACTTCAATGTTCCACAGCTGAAGATGAATGGAAAAGAGGCAAACGGGGAAGAGAAGATGAACAAGGAAGTGATTGAATTTCTTGAGGAAGAAAACGAAGTACCGAAACTGTCTGAAGAGTTGATGGCGTTCGAGAACTACATGAAGTTTTATCAGATTCCGTACTACGATGGTCAGTCGATAGCGCAGAATAACGTTCAGGAAAGCGTGGTTGATGATCTCTGGAGCTTTGAGGATGAAGGCATTCCTGCTTCTGTGATCTCATCAGCATTCTGAATGTGTCCCATTTCAATTGCGGAAAACTGAACCTTAATTTCTCCGTTTTCTGCCTTTGTTTGTTGGGTTGAGTGGGAATGTAATTAAATTGGGAAGAATTTGGTGACTTAAGTATTTGTTGAATTGTAATTTTTTTTTTTTCTTAATGGAATTGTATTCGAATTTCCAATTAAAATTAACCTGTGAAAATCGAAAATTATTTTA 1265 0.4324 MCGGAIIADFIPRHRGRRRSASDIWPDSFGKQNDFDWDYSQLDQEHSVPLKRSQPSSVNEQVEKPVKRQRKNVYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDEYSIQARRNPPPPLRRPNPTLYQHYDSNLNDVPKSLNLEFGYNLNQVGSIPSNGFETIGAMDIDPVVISGDENSGSGSGSEGAYSTTEFMGPIQNINFNVPQLKMNGKEANGEEKMNKEVIEFLEEENEVPKLSEELMAFENYMKFYQIPYYDGQSIAQNNVQESVVDDLWSFEDEGIPASVISSAF 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00399 321 SMART rav1_2 73 136 IPR001471 GO:0003700|GO:0006355
Bach8g00399 321 ProSiteProfiles AP2/ERF domain profile. 73 130 IPR001471 GO:0003700|GO:0006355
Bach8g00399 321 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Bach8g00399 321 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Bach8g00399 321 PANTHER DNA-BINDING DOMAIN 47 235 IPR044808 GO:0003700|GO:0009873
Bach8g00399 321 FunFam Ethylene-responsive transcription factor 2 72 131 - -
Bach8g00399 321 SUPERFAMILY DNA-binding domain 73 131 IPR016177 GO:0003677
Bach8g00399 321 Gene3D AP2/ERF domain 73 131 IPR036955 GO:0003700|GO:0006355
Bach8g00399 321 MobiDBLite consensus disorder prediction 46 62 - -
Bach8g00399 321 CDD AP2 74 131 IPR001471 GO:0003700|GO:0006355
Bach8g00399 321 MobiDBLite consensus disorder prediction 46 67 - -
Bach8g00399 321 MobiDBLite consensus disorder prediction 128 151 - -
Bach8g00399 321 Pfam AP2 domain 73 122 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00399 Bach-Chr8 2590415 2591771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00399 1 131 AP2-EREBP Transcription Factor Family AT3G16770 55.147 2.37e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach8g00399 AP2 8.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00399 K09286 - qsa:O6P43_010814 404.831