Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00388 GCACCTTTTACAAATCCGCAGAAATTTTCTTCTCCATTTATCATTTCTGTTTATAGTTTTTAGGCGTCAATGGCGACGAGAAATCGAACTATACAGTACAGAAAGTACAGAGACGCTGTGAAGAGCGTACGCTCTCCTTTGTCTTCGTCTATGTCTGCTGCGGGCGGCCCTGTGATTGAAATGGTGAGCACTTCACTTCTTCGTAGCAATCAATCTTCATATGCTCCTTTAAGCACCGAAGAACCCGGTCCTTCAAGAGATGCATTTACTGTGGGTTTGCCACCAGCTTGGGTGGATGATTCTGAAGAAATAGCTACAAACATACAACGTGCTCGTGTTAAAATGTCTGAGTTAGTCAAGGCTCATGCAAAGGCTTTAATGCCCTCCTTCGGTGATGGCAAGGAAGATCAACATCAGATTGAGGTTCTTACCCGAGAAATTACAGATCTCTTGAGAAAGTCTGGAATGAGGCTAAAGAGGCTTTCTGCCACTAGTGTGTCCTCTGAGGATTCAAATCTTAGAAAAAATGTGCAGCGTTCCCTTGCTACTGACCTTCAGAACCTTTCTATGGACCTCCGGCGGAAGCAATCAGCATATTTGAAACGTTTGCAGCAGCAAAAAGAGGGTTATGATGGGGTTGACTTGGAGATGAACTTGACTGGGAACAAATTTGACTTTCAGGACGATGGATTTAGTGATGTGGGTTTCAGTGAACAGCAAATAACAAAGCTAAAGAAAAGTGAGCAGCTCTCAGAGGAAAGGGAAAGAGAGATTGAACAGGTCGCTAAATCAGTTAATGAGCTTGCTCAGATCATGAAGGATCTCTCTGTCCTTGTGATAGACCAGGGAACTATCGTTGATAGGATTGATTACAACATTCAGAGTGTCGCGACATCTGTTGAGGAGGGCTTTAAGCAATTGGAAAAGGCAGAGAGATCGCAAAAAAGAGGAGGAATGGTTACGTGTGCAACAGTGCTTGTCATAATGTGCGTCATCATGCTAGTCCTCTTGATACTCAAGGAGATATTCTTGTAGTCGTATTTCTCATTGCAAATGACTGCATGGCACCTGCTTGTTGTAATGCTAATTGTCTCTCCATAGGCCAAGGAGAATGAAATCGCGTTCTATCTGAAGAAATTGCCGTCAACATTATGATAATGCACTTCAGATATGGGGAGTAGGGAGATTGATGCTTCTCTGTTCTTGTATTGTCCATGACTAACAAGCTATAACGAGGGTCTGGGAATTTGTTATATTGAGGGGCCCCAGATTTTAAAGACCCCGCCCATTATTTAGAGGAAACGGGGATATTTCTTGAACAATTTCTTTATACAAATATGTGTACTTTTATGAACTAATTGTAGTTTGGCATACGTAAAGGTGGTTTCGGGTCTTCTCTAAATCTTAATAGATGCTAATGATTCTTCTCTCTTTGTAATTATTTAGGCTGAACACGACAAAATATGTATTACTT 1474 0.4172 MATRNRTIQYRKYRDAVKSVRSPLSSSMSAAGGPVIEMVSTSLLRSNQSSYAPLSTEEPGPSRDAFTVGLPPAWVDDSEEIATNIQRARVKMSELVKAHAKALMPSFGDGKEDQHQIEVLTREITDLLRKSGMRLKRLSATSVSSEDSNLRKNVQRSLATDLQNLSMDLRRKQSAYLKRLQQQKEGYDGVDLEMNLTGNKFDFQDDGFSDVGFSEQQITKLKKSEQLSEEREREIEQVAKSVNELAQIMKDLSVLVIDQGTIVDRIDYNIQSVATSVEEGFKQLEKAERSQKRGGMVTCATVLVIMCVIMLVLLILKEIFL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00388 321 Gene3D - 71 279 - -
Bach8g00388 321 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 225 287 IPR000727 -
Bach8g00388 321 SMART tSNARE_6 220 287 IPR000727 -
Bach8g00388 321 FunFam Syntaxin-43 71 279 - -
Bach8g00388 321 SUPERFAMILY t-snare proteins 70 280 IPR010989 GO:0016020|GO:0016192
Bach8g00388 321 Coils Coil 221 244 - -
Bach8g00388 321 SMART SynN_4 65 181 IPR006011 GO:0016020
Bach8g00388 321 PANTHER SYNTAXIN 76 307 IPR045242 -
Bach8g00388 321 CDD SNARE_syntaxin16 229 286 - -
Bach8g00388 321 Pfam SNARE domain 261 313 IPR000727 -
Bach8g00388 321 ProSitePatterns Syntaxin / epimorphin family signature. 231 270 IPR006012 GO:0005484|GO:0006886|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00388 Bach-Chr8 2528807 2532698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00388 1 321 SNARE and Associated Proteins AT5G26980 70.031 2.19e-159 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00388 K08489 - gmx:100803629 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00388 8 2528807 2532698 Bach8g00388 8 2528807 2532698 ECH
Bach8g00388 8 2528807 2532698 Bach1g03171 1 41089765 41093205 ECH