Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00372 ATGTTGGAAACGAGTTATCGATCTCAAGTGTTTCTCGGCGTTCATTTTGTACTATTTGGTTCTGATCCTACCAAAGAAAATAAGGTCCGATTCAAGCTTTTAAATGGCGGTGGAGTTGATGTAAGTCAATACAGCCGAAGTTGCACTCATGTCATTGTGGATAAGCTTGTATATGATGATCCTGTTTGTGTTGCTGCACGAAGTGAAGGCAAGACTCTTGTCACTGCCCTGTGGGTTGATCATAGTGCTGATATTGGAATGCCGGTTGACCCTACCTCGGTTATGTACAGACCTCTTAAAGATTTAAATGGAATAACGGCTGCCAAAAATGTGATTGTGTGCCTGACTGGTTATCAATGTCAGGATCGGGATGACATTATGACAATGGTTGGCCTGATGGGCGCCGAGTTTTCTAAGCCATTGGTGGCCAACAAGGTTACTCATCTTATATGCTACAAATTCGAAGGGGAGAAGTATGACCTTGCCAGGAAAGTGAAAACAATAAAACTAGTTAATCATCGTTGGTTAGAAGATTGCTTGAAGCATTGGGTGCTGCTTCCTGAAGATAAATACAAAAAGAGTGGTTATGAATTAGAGATGATGGAGGCAAAGGCTAAGGATTCTGAAGAAGAATGTGAACATTCCTCGCAGGGGTGCTCTGGGAAAAGAAATATAAACAAGAGTCCCCTTGGGTCGAAAAATGGTCAAGCTACAACCCACGACTCAACAAAATCTGTCAGAGTAGCGACGAATGCATTCCAAGATTGTCCTGCTCCTGAGGGTTTGCAGGAAGTGAATAAGGTTAAATCACTTCCCACAAATGAGAATACCGCACATCAAGCCTCAAGCTTTGACGATGTTAATGATCTCAATCAAAGTTTTCAGGATTCTGGGGCTTCTAGACATGCTACATCATGTCAGCTACCTGACGCAAATGCTAGAGCTACCGATCCTAGGAAAACCAATGTACAAATGGCATTTGGCTTCCAGGATCTTGGTATCTCTGGAAATGGAAATTCATCTGGTCAGCTATCTGATGTACAAGTTGGCACTTCTGAATCTAAGAAGTTGGTAAATGACTTGATGTTAACTTCTGAAAGTGCTGAAGGATTTGCACATTCAGAGGCAAAGGTGAGTCCAAAATGTTACTCCAAGAAAAACACGAGGAGGTTTTCACTTTCAAGGACATCAGATGAAAGCTCAGGCAATTTAACTGGCCATTCTATGTCACCTTTGGATGATTTGAAATTTGGTACCGATCTTGAAACTTCTTCCAGCAAGGTAGAAAACCCAGAGGAACGAATCACCTCTTCTTGTATTGAAGGTTCTGGTAAAGAAAATGATTTTACTCATGGGGGAGAATCCACTAGTTTACTGCCTCAGAAGAGGACGATTGAAGCTTCTCTTACAAAATTAAAATCAAGGAAGATAAGTTCTGATGTAGAGTCCTCCCTTGGAAGAATCTCATCTGCGAATGGCAAAACCCAAGGGTTGAAGTTGTCATCTTTCATCAATGAACCACCCGAGACTGAAGCTGATATTTTCGCTGATGATGGTGCTAACAAACCGAATAGTTCCTCAAAATGTTTGGGCTCAGAGTCTGCGGAGTGTGATAATGCCAATCAGGATTCAGCTCAGACGTCTGTTAAAAATGGTTTGAGTGAATCTAAGACTAATGGCAAGCCTGATGGGGCAGGTTTTATTTTTGGAGAGTCATGTCATGATGGTAAAGAAATACAGGTACAGAATGAGAAGAAAGATTTTCAGTGTTCATCTCCAAGTAATAAGAAATTTCGAAACGAGGAATCTAGCGGTCTTCCTAGTATGGATTTATGCAATAACGTAAGCACTAGCTTGTGTAAAAAATCACCTCGGGAGAATACGTTTACCAAAAAAAGTTTGGGTTCTAGACCTAAATTAAGGGCTACTACTAAACAGAAGGGTCCTCTTTGCTTGAATAAAACAAATCCTCAAGGTGATGGTGTAACTTCAAGTGGATGCCAAGAGAAAGCAACTTGTGATGCTGAGAAGCTTCCGATGTCCTCTCGAACTGTCGATGTCGAAATATCATCGGAGCGAGAAAAAGTTAGTAAATCAGCAGAAAAGTCTGGTAACAGAATTGACTTTATGGATGACGAAACAGAGGCGCCAGAGGATAAATATGAATATGATGTGGGGGTGGCGCTTAACAGAAAGAAGTCTGAATTGGTTCATCTTTCAAAGAAAGTGGATAAAAGGACAGAACAGATGTCGGAATCGATTTGCCATACAACGAAATGCGAGGAAGAAAGGCCTGCAAAGGTAGAAAAAGATGGAACTAGGAAACAAAAAGCAGTCTGTAAGACGAATCTGGAGCTGGTGGAGTCAACTTCAAAGGTGAAAGAAAAGAATAAAAAGCGTCCCGCAGGAAGAACCAAGACAAAGACCGCAGTTCAAATGGATGCATCAAAATCTGTGGAGGCTGTAGATGGGATTAAGATTTATGACGATAGTAAAGATGTGGCAGAGATGGAATCCCTTGAAAAAAAGTCAGTTCCTACTTGTAGAACTGATGCTTCAAATTCCCTAACAAATAAGCCAGACAATTTTTTTGAAGTAGATAAGGAGAACAGACCAATTCAAGAGCCGGATAAAGAGGTGGTCAAATGTCTCGGAAATTCAACAACTAAATCGAGTGCATGGCCAGAAAAGACCAAACAAGAGGCTAGAAAAGCAGGTCTTAATTCGCCTATACAAGGTAACACCAGAGTGGAACCTGAACCTGCGTGTTTTATATTAAGTGGACATCGCCTACAGAGAAAGGAGTTTCAGCAAGTTATTAGGTGTTTAAAAGGAAAGGTTTGCCGGGATTCTCATCAGTGGGCATATCAGGCAACACATTTCATAGCCCCTGATCCTATACGCAGGACGGAAAAATTTTTTGCTGCTGCCGCGTCAGGAAGGTGGATACTTAAAATGGATTACTTAATTGCCAGTCGTCAAGAAGGAAAATTCTTGGCAGAGGAGCCTTATGAGTGGCACAAGAACAGCCTCACTGAGGATGGCGCAATCAATTTGGAGGCTCCAAGAAAGTGGCGACTGTTGAAAGAGAGAACGGGCCATGGTGCCTTCTATGGAATGCGGATTATTATATATGGGGATTGCATTGCCCCAACTTTGGATACTTTGAAGCGTGTAATCAAAGCTGGAGATGGAACAATATTGGCCACATCTCCTCCTTACACTCGCTTCCTTTATACTGGAATTGATTATGCTATAGTTAGTCCCGGCATGCCACGTGTTGACTTGTGGGTCCAAGAGTTCTTGAAAAATGAGATTCCCTGTGTTGTAGCAGACTACTTGGTCGAGTATGTATGCAAGCCTGGGTTCTCCCTTGAGAAACATGTACTATACGGGACTCATGCTTGGGCGGAAAGGTCATATGCTAACCTTCAAAGTAAGGGAGAAGAGATTATTGTGGATATCCTTCCTCCAAAAAATCTTGGTGATAGCGATACAATTTGTCAAGTCTGTGGATCACGAGATAGAGGGGAGGTAATGCTGATTTGTGGTGATGAAAGTGGTTCCGTTGGTTGCGGTATTGGCACCCATATTGGTTGCCGTGATCCTCCGCTCCAAGACGTTCCTCAGAAGGATTGGTTTTGTCCAAAATGCAGTAAAAGCTCAGAAGGCTCCAACTCTTCCAAGAAATCAAAAAAGAGAATCTTGTCTTCATCGAAGAGTAAGTGA 3729 0.4208 MLETSYRSQVFLGVHFVLFGSDPTKENKVRFKLLNGGGVDVSQYSRSCTHVIVDKLVYDDPVCVAARSEGKTLVTALWVDHSADIGMPVDPTSVMYRPLKDLNGITAAKNVIVCLTGYQCQDRDDIMTMVGLMGAEFSKPLVANKVTHLICYKFEGEKYDLARKVKTIKLVNHRWLEDCLKHWVLLPEDKYKKSGYELEMMEAKAKDSEEECEHSSQGCSGKRNINKSPLGSKNGQATTHDSTKSVRVATNAFQDCPAPEGLQEVNKVKSLPTNENTAHQASSFDDVNDLNQSFQDSGASRHATSCQLPDANARATDPRKTNVQMAFGFQDLGISGNGNSSGQLSDVQVGTSESKKLVNDLMLTSESAEGFAHSEAKVSPKCYSKKNTRRFSLSRTSDESSGNLTGHSMSPLDDLKFGTDLETSSSKVENPEERITSSCIEGSGKENDFTHGGESTSLLPQKRTIEASLTKLKSRKISSDVESSLGRISSANGKTQGLKLSSFINEPPETEADIFADDGANKPNSSSKCLGSESAECDNANQDSAQTSVKNGLSESKTNGKPDGAGFIFGESCHDGKEIQVQNEKKDFQCSSPSNKKFRNEESSGLPSMDLCNNVSTSLCKKSPRENTFTKKSLGSRPKLRATTKQKGPLCLNKTNPQGDGVTSSGCQEKATCDAEKLPMSSRTVDVEISSEREKVSKSAEKSGNRIDFMDDETEAPEDKYEYDVGVALNRKKSELVHLSKKVDKRTEQMSESICHTTKCEEERPAKVEKDGTRKQKAVCKTNLELVESTSKVKEKNKKRPAGRTKTKTAVQMDASKSVEAVDGIKIYDDSKDVAEMESLEKKSVPTCRTDASNSLTNKPDNFFEVDKENRPIQEPDKEVVKCLGNSTTKSSAWPEKTKQEARKAGLNSPIQGNTRVEPEPACFILSGHRLQRKEFQQVIRCLKGKVCRDSHQWAYQATHFIAPDPIRRTEKFFAAAASGRWILKMDYLIASRQEGKFLAEEPYEWHKNSLTEDGAINLEAPRKWRLLKERTGHGAFYGMRIIIYGDCIAPTLDTLKRVIKAGDGTILATSPPYTRFLYTGIDYAIVSPGMPRVDLWVQEFLKNEIPCVVADYLVEYVCKPGFSLEKHVLYGTHAWAERSYANLQSKGEEIIVDILPPKNLGDSDTICQVCGSRDRGEVMLICGDESGSVGCGIGTHIGCRDPPLQDVPQKDWFCPKCSKSSEGSNSSKKSKKRILSSSKSK 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00372 1242 Gene3D BRCT domain 99 224 IPR036420 -
Bach8g00372 1242 MobiDBLite consensus disorder prediction 218 244 - -
Bach8g00372 1242 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1159 1241 IPR013083 -
Bach8g00372 1242 ProSiteProfiles Zinc finger PHD-type profile. 1165 1221 IPR019787 -
Bach8g00372 1242 SUPERFAMILY FYVE/PHD zinc finger 1159 1222 IPR011011 -
Bach8g00372 1242 SMART PHD_3 1167 1219 IPR001965 -
Bach8g00372 1242 MobiDBLite consensus disorder prediction 513 565 - -
Bach8g00372 1242 MobiDBLite consensus disorder prediction 207 244 - -
Bach8g00372 1242 Pfam PHD-finger 1167 1220 IPR019787 -
Bach8g00372 1242 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 732 1234 IPR044254 -
Bach8g00372 1242 SUPERFAMILY BRCT domain 109 192 IPR036420 -
Bach8g00372 1242 SMART BRCT_7 1034 1121 IPR001357 -
Bach8g00372 1242 SMART BRCT_7 8 86 IPR001357 -
Bach8g00372 1242 SMART BRCT_7 105 183 IPR001357 -
Bach8g00372 1242 SMART BRCT_7 917 996 IPR001357 -
Bach8g00372 1242 MobiDBLite consensus disorder prediction 889 913 - -
Bach8g00372 1242 Gene3D BRCT domain 918 1032 IPR036420 -
Bach8g00372 1242 Gene3D BRCT domain 1033 1134 IPR036420 -
Bach8g00372 1242 MobiDBLite consensus disorder prediction 678 703 - -
Bach8g00372 1242 MobiDBLite consensus disorder prediction 1218 1242 - -
Bach8g00372 1242 MobiDBLite consensus disorder prediction 278 304 - -
Bach8g00372 1242 MobiDBLite consensus disorder prediction 584 605 - -
Bach8g00372 1242 Pfam twin BRCT domain 111 175 IPR001357 -
Bach8g00372 1242 SUPERFAMILY BRCT domain 8 92 IPR036420 -
Bach8g00372 1242 ProSiteProfiles BRCT domain profile. 924 1006 IPR001357 -
Bach8g00372 1242 MobiDBLite consensus disorder prediction 388 461 - -
Bach8g00372 1242 Pfam BRCA1 C Terminus (BRCT) domain 928 991 IPR001357 -
Bach8g00372 1242 MobiDBLite consensus disorder prediction 585 605 - -
Bach8g00372 1242 MobiDBLite consensus disorder prediction 419 461 - -
Bach8g00372 1242 CDD BRCT_TopBP1_rpt7 921 996 - -
Bach8g00372 1242 MobiDBLite consensus disorder prediction 791 812 - -
Bach8g00372 1242 Gene3D BRCT domain 2 95 IPR036420 -
Bach8g00372 1242 MobiDBLite consensus disorder prediction 687 703 - -
Bach8g00372 1242 MobiDBLite consensus disorder prediction 388 408 - -
Bach8g00372 1242 MobiDBLite consensus disorder prediction 520 558 - -
Bach8g00372 1242 ProSiteProfiles BRCT domain profile. 109 193 IPR001357 -
Bach8g00372 1242 SUPERFAMILY BRCT domain 924 1025 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00372 Bach-Chr8 2448627 2453917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00372 129 261 Core DNA Replication Machinery Family AT4G02110 57.143 1.10e-38 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach8g00372 BRCT 1.9e-05 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00372 K10728 - qsa:O6P43_007236 1199.5