Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00366 ATGGGAGAGGTAGTTTTGTTTATCGACGATTTGAGATCAATTTCCAGGTTTTATCGCTGTAGAATATGCCACGAAGACGAATTTGAGAGCTTAACAAGCTTGGAAGCTCCCTGTGCTTGCTCTGGGACCGTTAAGTTCGCTCATCGAGATTGCATACAGAGATGGTGCAACGAGAAAGGAAATACAACTTGTGAAATATGCCTCCAGCAATATGAACCTGGATACACAGCTCCTCCAAAGAAGCCTCAGAATCAGATAATTGATGCAGCAATGACCATTAGAGAAAGCCTACAAATTCCAAGAAGGGAGCATGAAGAAGAATTAAACGCAAGATTAGAGGGTATAGTTGAAGGAATAGCTGGAGACGATGAGTATGCTGAATGCACATCTGCCGCGGATAGAAGCGTGTCTTGCTGTCGATCACTGGCTTTGGCTTTCACCTTTGTTTTGCTCGTACGACAACTTTTCACGGTGCTCACAAATGGAACGGAAGACTACCCATTCACACTTCTTACAGTATTTATACTTAGGGCTACTGGAATTATTCTACCCATGTACATAATCATTAGGACGATCACAGCAATTCAAAACAGTGCTCGGCGTCGGCGTCGGTACCGCTATCAGGATTCTGATGACGATGGACAAACTGAGCCAACGCACGATGTGACTATTATACACTCATAGGTTCACATTTGATTTCATTTGGATCAGAGCATCACGCCGATGCTCA 730 0.4384 MGEVVLFIDDLRSISRFYRCRICHEDEFESLTSLEAPCACSGTVKFAHRDCIQRWCNEKGNTTCEICLQQYEPGYTAPPKKPQNQIIDAAMTIRESLQIPRREHEEELNARLEGIVEGIAGDDEYAECTSAADRSVSCCRSLALAFTFVLLVRQLFTVLTNGTEDYPFTLLTVFILRATGIILPMYIIIRTITAIQNSARRRRRYRYQDSDDDGQTEPTHDVTIIHS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00366 227 Pfam Protein of unknown function (DUF3675) 73 192 IPR022143 -
Bach8g00366 227 ProSiteProfiles Zinc finger RING-type profile. 20 67 IPR001841 -
Bach8g00366 227 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 18 202 IPR033275 -
Bach8g00366 227 SMART ringv_2 19 68 IPR011016 GO:0008270
Bach8g00366 227 ProSiteProfiles Zinc finger RING-CH-type profile. 12 74 IPR011016 GO:0008270
Bach8g00366 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 77 IPR013083 -
Bach8g00366 227 MobiDBLite consensus disorder prediction 205 227 - -
Bach8g00366 227 CDD RING_CH-C4HC3_MARCH 20 67 - -
Bach8g00366 227 FunFam E3 ubiquitin-protein ligase MARCH4 9 77 - -
Bach8g00366 227 Pfam RING-variant domain 20 67 IPR011016 GO:0008270
Bach8g00366 227 MobiDBLite consensus disorder prediction 205 219 - -
Bach8g00366 227 SUPERFAMILY RING/U-box 18 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00366 Bach-Chr8 2412782 2415329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00366 20 95 C3H Transcription Factor Family AT2G37950 33.766 5.98e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00366 - - pvy:116146752 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00366 8 2412782 2415329 Bach8g00366 8 2412782 2415329 ECH