Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach8g00366 | ATGGGAGAGGTAGTTTTGTTTATCGACGATTTGAGATCAATTTCCAGGTTTTATCGCTGTAGAATATGCCACGAAGACGAATTTGAGAGCTTAACAAGCTTGGAAGCTCCCTGTGCTTGCTCTGGGACCGTTAAGTTCGCTCATCGAGATTGCATACAGAGATGGTGCAACGAGAAAGGAAATACAACTTGTGAAATATGCCTCCAGCAATATGAACCTGGATACACAGCTCCTCCAAAGAAGCCTCAGAATCAGATAATTGATGCAGCAATGACCATTAGAGAAAGCCTACAAATTCCAAGAAGGGAGCATGAAGAAGAATTAAACGCAAGATTAGAGGGTATAGTTGAAGGAATAGCTGGAGACGATGAGTATGCTGAATGCACATCTGCCGCGGATAGAAGCGTGTCTTGCTGTCGATCACTGGCTTTGGCTTTCACCTTTGTTTTGCTCGTACGACAACTTTTCACGGTGCTCACAAATGGAACGGAAGACTACCCATTCACACTTCTTACAGTATTTATACTTAGGGCTACTGGAATTATTCTACCCATGTACATAATCATTAGGACGATCACAGCAATTCAAAACAGTGCTCGGCGTCGGCGTCGGTACCGCTATCAGGATTCTGATGACGATGGACAAACTGAGCCAACGCACGATGTGACTATTATACACTCATAGGTTCACATTTGATTTCATTTGGATCAGAGCATCACGCCGATGCTCA | 730 | 0.4384 | MGEVVLFIDDLRSISRFYRCRICHEDEFESLTSLEAPCACSGTVKFAHRDCIQRWCNEKGNTTCEICLQQYEPGYTAPPKKPQNQIIDAAMTIRESLQIPRREHEEELNARLEGIVEGIAGDDEYAECTSAADRSVSCCRSLALAFTFVLLVRQLFTVLTNGTEDYPFTLLTVFILRATGIILPMYIIIRTITAIQNSARRRRRYRYQDSDDDGQTEPTHDVTIIHS | 227 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach8g00366 | 227 | Pfam | Protein of unknown function (DUF3675) | 73 | 192 | IPR022143 | - | |
Bach8g00366 | 227 | ProSiteProfiles | Zinc finger RING-type profile. | 20 | 67 | IPR001841 | - | |
Bach8g00366 | 227 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 18 | 202 | IPR033275 | - | |
Bach8g00366 | 227 | SMART | ringv_2 | 19 | 68 | IPR011016 | GO:0008270 | |
Bach8g00366 | 227 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 12 | 74 | IPR011016 | GO:0008270 | |
Bach8g00366 | 227 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 11 | 77 | IPR013083 | - | |
Bach8g00366 | 227 | MobiDBLite | consensus disorder prediction | 205 | 227 | - | - | |
Bach8g00366 | 227 | CDD | RING_CH-C4HC3_MARCH | 20 | 67 | - | - | |
Bach8g00366 | 227 | FunFam | E3 ubiquitin-protein ligase MARCH4 | 9 | 77 | - | - | |
Bach8g00366 | 227 | Pfam | RING-variant domain | 20 | 67 | IPR011016 | GO:0008270 | |
Bach8g00366 | 227 | MobiDBLite | consensus disorder prediction | 205 | 219 | - | - | |
Bach8g00366 | 227 | SUPERFAMILY | RING/U-box | 18 | 72 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach8g00366 | Bach-Chr8 | 2412782 | 2415329 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach8g00366 | 20 | 95 | C3H Transcription Factor Family | AT2G37950 | 33.766 | 5.98e-07 | 47.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach8g00366 | - | - | pvy:116146752 | 296.589 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bach8g00366 | 8 | 2412782 | 2415329 | Bach8g00366 | 8 | 2412782 | 2415329 | ECH |