Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00313 ATGGGAGGAAAAGTGATAGTCTCTGCCGTCTCACTCATCCTTGTGGTGGGTGTAGCTTTGGGCGTCGTGGCCGTTGTTAACTTCAGGAAAGAAAGTGACCCTACCACAGCAGCTAATGTTAAGGCTGTTCAAAGCATTTGTGAGAACGCAGAGGACCAGAAACTTTGCCATGAAACTCTTATCCCCGCCAAGGGCTCTCCCTCAAACCCAAAAGAATACTACAAGGCTGCAGTGGAAGCAACCATCAATAGCGTGATCAAGTCCCTAAATATGACTGACAAGCTATCCGTTGAGCATGGAGACAAAGACGCAGGCATCAAGATGGCCCTTGATGACTGCAAGGACTTGTTGCAATTCGCCATGGACAGCCTTCAGTCATCGGCTGACTTGGTTCGTGACCACGACATCCAAGCTGTTCATAATCGCACCGATGACTTCAGGAATTGGTTGAGTTCTACCATTGCATACCAGCAAACTTGCATGGACGGATTTGACACAGACGGTGAGAAGAAGGTGCAGGAACAGTTGCAATCCAATGGTTTGGACGATGTGGGAAAACTCACTGGCATGACACTTGACATTGTGTCTAGCTTGTCCAAGATTCTTGAGTCATTCAACTTGAACTTGAACGTGAAGCCTGCTTCTTCTCGTCGTCTTCTTAGCATCGATGTGGATAGCCAAGGGTTCCCCACTTGGTTCTCCGCTGCTGATCGCAAGCTCTTGGCTAAGTTGCGTAGGGGAGGCGGACATCATAGGGTGATAGGAATCAGGCCCAACGCAGTTGTTGCCCAGGATGGAAGTGGCACTCATAAAAGCATTGCTGCTGCTATTGCTGCTGTTCCTAAGAAATCAAATGCCAGATTTGTTATCTACGTTAAGGCTGGAATCTACGACGAGTACATTACCGTTCCCAAGGATGCCAAGAATGTGCTTATGTACGGTGATGGCCCTACAAGGACCATTGTTACTGGCCACAAGAACTTTGCACAAGGCACCAAGACAATGCAATCTGCCACCTTCGCCGCTGTTGGAGAGGGGTTCATTGCCAAGTCTATGGGATTCGAGAACACTGCAGGTCCACAAGGGCACCAAGCCGTGGCACTTCGTGTGCAGAGTGATATGTCTGCTTTCTTTGATTGTGCAATTCATGGTTTCCAAGACACCTTGTACGCTCACGCCAATCGTCAGTTCTACCGCAACTGTGAAATCTCTGGTACTGTGGACTTCATCTTCGGCATGTCAACCACATTGATCCAAAACTCTAGGATCATTGTGAGGAGGCCAGGCCCAGGCCAATTCAACACAGTGACTGCAGATGGCACGACCCAAAGGAACCAGATTACTGGTATTGTGATCCAAAATTGTGAGATCATCCCAGAGATGCAACTGTTCCCTGTAAGATTCCAAGTGAGATCGTACTTGGGAAGGCCATGGAAGGCATACTCAAAGACAGTGATTATGGAATCCACCATTGGTGACTTCATTCAGCCAGATGGATGGACTCCTTGGAGTGGAAACCTGTACCTTAACACCTTGTACTATGCTGAGTATAACAACAGAGGCCCTGGGGCTGACCTACAAAGAAGGGTTAGATGGACGGGTTACCGTGGAGCAATTAGCAGGAATGAAGCTGCCCAGTTCACTGTTGGTGCATTCCTCAGGGCTGGCCCAGTCGGCAGAGCTGAGGATTGGTTGAGGGTTACTGGAATTCCTTTCGAGATTGGCTTCACTGCACCTTGA 1740 0.4879 MGGKVIVSAVSLILVVGVALGVVAVVNFRKESDPTTAANVKAVQSICENAEDQKLCHETLIPAKGSPSNPKEYYKAAVEATINSVIKSLNMTDKLSVEHGDKDAGIKMALDDCKDLLQFAMDSLQSSADLVRDHDIQAVHNRTDDFRNWLSSTIAYQQTCMDGFDTDGEKKVQEQLQSNGLDDVGKLTGMTLDIVSSLSKILESFNLNLNVKPASSRRLLSIDVDSQGFPTWFSAADRKLLAKLRRGGGHHRVIGIRPNAVVAQDGSGTHKSIAAAIAAVPKKSNARFVIYVKAGIYDEYITVPKDAKNVLMYGDGPTRTIVTGHKNFAQGTKTMQSATFAAVGEGFIAKSMGFENTAGPQGHQAVALRVQSDMSAFFDCAIHGFQDTLYAHANRQFYRNCEISGTVDFIFGMSTTLIQNSRIIVRRPGPGQFNTVTADGTTQRNQITGIVIQNCEIIPEMQLFPVRFQVRSYLGRPWKAYSKTVIMESTIGDFIQPDGWTPWSGNLYLNTLYYAEYNNRGPGADLQRRVRWTGYRGAISRNEAAQFTVGAFLRAGPVGRAEDWLRVTGIPFEIGFTAP 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00313 579 Pfam Plant invertase/pectin methylesterase inhibitor 42 194 IPR006501 GO:0004857
Bach8g00313 579 FunFam Pectinesterase 254 576 - -
Bach8g00313 579 Pfam Pectinesterase 259 554 IPR000070 GO:0030599|GO:0042545
Bach8g00313 579 SMART PMEI_2 38 194 IPR006501 GO:0004857
Bach8g00313 579 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Bach8g00313 579 PANTHER PECTINESTERASE 18 566 - -
Bach8g00313 579 CDD PMEI-like_3 45 200 - -
Bach8g00313 579 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 200 IPR035513 -
Bach8g00313 579 NCBIfam pectinesterase inhibitor domain 19 196 IPR006501 GO:0004857
Bach8g00313 579 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 199 IPR035513 -
Bach8g00313 579 ProSitePatterns Pectinesterase signature 1. 284 303 IPR018040 -
Bach8g00313 579 Gene3D - 254 576 IPR012334 -
Bach8g00313 579 FunFam Pectinesterase 39 199 - -
Bach8g00313 579 SUPERFAMILY Pectin lyase-like 256 572 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00313 Bach-Chr8 2086188 2088155 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00313 1 576 Carbohydrate Esterase AT2G47030 40.924 2.52e-144 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00313 K01051 - gmx:100775246 750.355