Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00300 ATGGGCAAAGCCTCTAGTTCTTCCTCATCTTCTATTAACAGCACCAACCAAACTGCTTCCTCTCTCACATGCCACAACTCAGGCCTTCCTACAGATCTTAGGCTTGAACTAAGCGCTTATGCTACTCAACAAGTTGGCTTTTCTCTTTCAAGAGGGGAATCATCAGAGTGGGCACCAACCCAACGGCCACTTGCTGCTGCTGCTGCTGAAATATATGATTGCAATGACCGTAGCAGCTTCTTTGTGAAGGTCTACATGGAAGGCATTCCTATTGGGAGAAAACTTGATGTACTAGCACATGATGGCTACCATGAGTTAGTGAAGACTCTTGAAAACATGTTTGACACTACCATTCTCTGGGGAACTAAGTTGGACGGATTGCAATCAGAGAGATGTCATGTGCTAACTTATGAAGACGAAGAAGGGGATTTCTTGATGGTTGGGGATGTTCCTTGGGAAATGTTTTTATCCACCGTAAAGAGATTGAAGATCACCAGAATAGACACATTTGGATGCTGA 519 0.4412 MGKASSSSSSSINSTNQTASSLTCHNSGLPTDLRLELSAYATQQVGFSLSRGESSEWAPTQRPLAAAAAEIYDCNDRSSFFVKVYMEGIPIGRKLDVLAHDGYHELVKTLENMFDTTILWGTKLDGLQSERCHVLTYEDEEGDFLMVGDVPWEMFLSTVKRLKITRIDTFGC 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00300 172 Gene3D - 73 170 - -
Bach8g00300 172 ProSiteProfiles PB1 domain profile. 79 172 IPR000270 GO:0005515
Bach8g00300 172 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 31 166 IPR003311 GO:0005634|GO:0006355
Bach8g00300 172 MobiDBLite consensus disorder prediction 1 23 - -
Bach8g00300 172 SUPERFAMILY CAD & PB1 domains 73 165 - -
Bach8g00300 172 Pfam AUX/IAA family 75 166 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00300 Bach-Chr8 1997366 1998160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00300 61 164 B3 DNA Binding Superfamily AT4G23980 34.286 4.57e-14 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bach8g00300 AUX_IAA 1.9e-29 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00300 K14484 - gmx:100818376 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00300 8 1997366 1998160 Bach1g03076 1 40441716 40442533 BWGD