Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00287 ATGGAAAGGTTAGTATTCACCAGTCTAACATTGTTGGTGGGGTTCTTCTCCACAGAACTTAGAATGGCATCAGCGGCAGGTTGGTTGAATGCTCATGCAACATTCTATGGTGGAAGCGATGCCTCAGGAACAATTAAGGGTGCATGTGGTTATGACTTACACACGGATGGTTATGGTATAAAAACAGCAGCCTTGAGTACTGCTTTATTCAATAACGGCAAGTCATGCGGTGGGTGCTATCAGATTGTTTGTGACGCAACCCAAGTACCCCAGTGGTGCATAAGTGGCAGCAGCATTACAATTACTGCCACAAACTTCTGTCCACCAAACTATGATTTGCCTATTGACGATGGTGGTTGGTGCAATCCTCCAAGACAACACTTCGACTTGTCTCAACCTGCATTTGAGACCATCGCCAAGTACAAGGCTGGAATTGTACCAATTTTCTATAGGAAAGTAAAGTGCAAAAGAAGTGGAGGCATCAGATTCACAATCAATGGAGTTGACTATTTTGAGTTAGTGCGTGTAAGCAACGTCGGTGGAGTTGGAGAGGTCTCCCAAGTTTGGATCAAAGGATCGAACATGAGCAACTGGGAAACGATGTCAAGGAATTGGGGTGCGAACTGGCAGAGCCTACGCTATCTCAACGGTCAGAGCTTGTCCTTCAGAATCCAACTCAGTAACCGAAAGACTCGCACAGCTTATGATGTGGCTCCTTCAAACTGGAATTTTGGCCAGTCCTTCGTCAGCCGCATTCAGTTCTGA 765 0.4588 MERLVFTSLTLLVGFFSTELRMASAAGWLNAHATFYGGSDASGTIKGACGYDLHTDGYGIKTAALSTALFNNGKSCGGCYQIVCDATQVPQWCISGSSITITATNFCPPNYDLPIDDGGWCNPPRQHFDLSQPAFETIAKYKAGIVPIFYRKVKCKRSGGIRFTINGVDYFELVRVSNVGGVGEVSQVWIKGSNMSNWETMSRNWGANWQSLRYLNGQSLSFRIQLSNRKTRTAYDVAPSNWNFGQSFVSRIQF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00287 254 PRINTS Expansin/Lol pI family signature 143 159 IPR007118 GO:0005576
Bach8g00287 254 PRINTS Expansin/Lol pI family signature 236 250 IPR007118 GO:0005576
Bach8g00287 254 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Bach8g00287 254 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Bach8g00287 254 PRINTS Expansin/Lol pI family signature 198 212 IPR007118 GO:0005576
Bach8g00287 254 SUPERFAMILY PHL pollen allergen 157 249 IPR036749 -
Bach8g00287 254 Pfam Lytic transglycolase 62 150 IPR009009 -
Bach8g00287 254 Gene3D - 16 156 IPR036908 -
Bach8g00287 254 PRINTS Expansin signature 57 71 IPR002963 GO:0009664
Bach8g00287 254 PRINTS Expansin signature 207 228 IPR002963 GO:0009664
Bach8g00287 254 PRINTS Expansin signature 159 171 IPR002963 GO:0009664
Bach8g00287 254 PRINTS Expansin signature 135 148 IPR002963 GO:0009664
Bach8g00287 254 PRINTS Expansin signature 171 192 IPR002963 GO:0009664
Bach8g00287 254 PRINTS Expansin signature 86 97 IPR002963 GO:0009664
Bach8g00287 254 PRINTS Expansin signature 99 109 IPR002963 GO:0009664
Bach8g00287 254 PRINTS Expansin signature 118 135 IPR002963 GO:0009664
Bach8g00287 254 PRINTS Expansin signature 236 252 IPR002963 GO:0009664
Bach8g00287 254 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 170 250 IPR007117 -
Bach8g00287 254 SMART dpbb_1 62 150 IPR007112 -
Bach8g00287 254 SUPERFAMILY Barwin-like endoglucanases 21 178 IPR036908 -
Bach8g00287 254 PANTHER EXPANSIN-A15 10 250 IPR002963 GO:0009664
Bach8g00287 254 CDD DPBB_EXPA_N 27 155 - -
Bach8g00287 254 Gene3D - 161 254 IPR036749 -
Bach8g00287 254 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 160 IPR007112 -
Bach8g00287 254 Pfam Expansin C-terminal domain 161 239 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00287 Bach-Chr8 1912340 1913345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00287 5 254 Expansin Gene Family AT4G01630 68.898 7.16e-130 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00287 - - gmx:100813434 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00287 8 1912340 1913345 Bach1g03092 1 40545896 40546898 BWGD
Bach8g00287 8 1912340 1913345 Bach8g00287 8 1912340 1913345 ECH