Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00281 CCTTATCGTCTTTCTTCCTGTCACCCTATCCCCTGCAAATTAGAATACTTGCTTTGCAGAACTCGCCGCTTCTTCAGCCCATCTCTTCCCACCTAAATATCTTCCTCATTATCCTTGCAAAGTGCTTATTTTCTCTTCCATTTTTGTGTTGGGGGACTTTCTGAGGGACTGGAAATTGAGAAGTGTGCTCTGCTACTTCTGCAAAGAGAAAATGGCTTCTATTACAGGTGTTTCTTCAATACTCCAGACTCCTGCTCTGGAACTATATAAAAGGACTACCACAACGGGTACTGCGAATTCTCTTTCGTTGCAATTATCAGATAACAAGTCCCACTTTAACAACGTTCTGAGAGCTCATCTTAGGAATAATGGTGCTGGCAACTTCAAGAGTGGGTTTAAACCGAGATTTAGTTTCGTTGCTTCGGCTATTGCCACACCCAATTCTTCCATCCTAAGTGAAGAAGCTTTCAAGGGAATTGGTGGGGGATTCTCCGATGATGACTCTTTGGGTGATGTCAGTGGAAACGAGGATTATGACCATGAGTCAGAAACTGAGGCCTCTGCTGTTGCTAATGAGGACGAACTCGACATTTCCAATCTGGGTTTACCTCCGCGCCTTGTGGATTCACTTCAAAGACGCGGCATTACTCAGCTTTTCCCTATTCAGAGAGCTGTTTTAGTACCTGCACTAGAAGGTCGAGATCTTATTGCTCGTGCGAAGACTGGGACTGGGAAGACACTAGCCTTTGGGATTCCAATTATTAAACGCCTCAATGAAGATGAACGAAGTTCTCAGAGGAGGTCTGGTAGACTTCCTAAAGTATTGGTCCTTGCACCTACCAGGGAGCTAGCGAAGCAAGTGGAGAAAGAGATTAAAGAATCTGCACCCTATCTAAACACAGTTTGTGTTTATGGGGGTGTTTCTTACGTTACACAGCAAAGTGCACTTTCACGTGGTGTCGATGTGGTGGTTGGAACTCCTGGTAGAATAATTGACCTAATAAATGGGAATAGCCTTAAACTGAGTGAAGTTGATTTCTTAGTCCTTGATGAAGCTGATCAGATGCTTGCTGTCGGGTTTGAGGAGGATGTGGAAGTCATTTTAGAGCAACTTCCATCTGAGAGGCAGAGCATGCTTTTTTCTGCAACCATGCCTGGTTGGGTGAAGAAATTGGCAAGAAAATATTTGAAAAATCCATTGACTATTGATTTGGTTGGAGAACAAGAAGAAAAACTTGCAGAAGGGATCAAACTTTATGCTCTATCAGCCACAGCTACTTCAAAGCGGACAATTCTTTCTGATCTTATAAATGTTTATGCAAAGGGTGGGAAGACTATTGTCTTTACACGGACAAAAAGAGATGCTGATGAAGTTTCATCGGCATTAACAAATACCTTAGCTTCTGAGGCACTGCATGGCGATATATCTCAGCATCAGAGAGAGAGAACATTGAATGGTTTTCGGCAAGGGAAATTCACAGTACTTGTTGCCACTGATGTTGCAGCTCGTGGACTTGACATTCCGAATGTTGATTTGATCATCCACTATGAACTTCCCAATGATCCTGAGACTTTCGTACACCGCTCTGGTCGCACTGGACGTGCAGGAAAAGAAGGTAGTGCAATTCTAATGTATACCAGCAGCCAGAGGAGAACAGTTAGATCTCTTGAGCATGATGTAGGGTGCAAATTTGAATTTATTACTCCACCATCTATAAACGAGGTTTTGGAGGCATCTGCTCAGCAAGTGGTTGCCACACTTAACAGAGTTCATCCTGAGTCTGTTGAGTTTTTCACCGCAACTGCACGAAAACTAGTTGAAGAACAAGGAGCAACTGCGCTTGCTGCTGCACTAGCACATCTGAGTGGATTCTCTCGACCTCCCTCATCACGGTCTCTTATAAACCATGAGCAGGGTTGGATTACATTGCAACTGACTCGAGATTCAGGCAATTCTCAAAGATTCTTCTCAGCAAGATCAGTCACTGGGTTTCTTTCTGATGTTTATTCTCCAGCTGCTGATGAAGTTGGAAAGATACATATAATTGCAGACGAAAGGGTTCAAGGAGCAGTTTTTGATCTTCCAGAGGACATCGCTAAAGAGTTACTGAATCAGGAAATACCGCCTGGGAACACTATTTCCAAGATCAGCAAGCTGCCTCCCTTGCAAGATGATGGGCCTCCAAGTGATTTCTATGGGAAGTTTTCTGATAGAGATAGAAGTAGGCGAGGAGGTTCTAGGGATCAGAGAGGTTTTAGAAACTCCCGGGGATGGGATGATGGCCAAAACTCAGATGCTGACTTTGATAATTCATTTAGGAGAGGTGGTCGAAGTTACAAAACTGGCAACAGCTGGTCTGGAGCATCGAGAAGCAGCAGGGATGATCGGCTAATTGGAGGTAGACGATCAAGCAGGTCTTCATCATCAGACAGGAACTTTGGAGGATCCTGTTTTAATTGTGGGCAACCTGGGCATCGAGCATCAGACTGTCCTAACAAGCGAGGTTTTTAAATATTTCTGTTTCATCATCTTAATTCAGGGCACCACGTCATCCTATACTCAAGCTGCTGCTGCCCTAATGCATTATGGAAGTAGATGGATTATTCCCTCAAAGAATTACAGGAATCACCGTTAGTTTGTCTCCTCCCCTCCTCGACATAATCTCCATAGAGGTCTCCATTTTAGGTCCTAGATTTTTTCCTTAGTCTTAGTCTTGGCGTAAAACATATTTTGTGTTGGGGAAGTGATATCTAATGTGGCAAGAACAGTAATTATATTGGTCCCCGTATTGTCTGCCTAACCATTTTGTTTTAGTAAATGATCTGTTTGAACCTGTATGGTTCATAAAAAGACAGGAATACCTATGAATGAATGGAAAATGAAATTTCAAA 2892 0.4319 MASITGVSSILQTPALELYKRTTTTGTANSLSLQLSDNKSHFNNVLRAHLRNNGAGNFKSGFKPRFSFVASAIATPNSSILSEEAFKGIGGGFSDDDSLGDVSGNEDYDHESETEASAVANEDELDISNLGLPPRLVDSLQRRGITQLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKRLNEDERSSQRRSGRLPKVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQSALSRGVDVVVGTPGRIIDLINGNSLKLSEVDFLVLDEADQMLAVGFEEDVEVILEQLPSERQSMLFSATMPGWVKKLARKYLKNPLTIDLVGEQEEKLAEGIKLYALSATATSKRTILSDLINVYAKGGKTIVFTRTKRDADEVSSALTNTLASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGSAILMYTSSQRRTVRSLEHDVGCKFEFITPPSINEVLEASAQQVVATLNRVHPESVEFFTATARKLVEEQGATALAAALAHLSGFSRPPSSRSLINHEQGWITLQLTRDSGNSQRFFSARSVTGFLSDVYSPAADEVGKIHIIADERVQGAVFDLPEDIAKELLNQEIPPGNTISKISKLPPLQDDGPPSDFYGKFSDRDRSRRGGSRDQRGFRNSRGWDDGQNSDADFDNSFRRGGRSYKTGNSWSGASRSSRDDRLIGGRRSSRSSSSDRNFGGSCFNCGQPGHRASDCPNKRGF 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00281 766 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 125 153 IPR014014 GO:0003724
Bach8g00281 766 Pfam Helicase conserved C-terminal domain 359 466 IPR001650 -
Bach8g00281 766 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 361 506 IPR001650 -
Bach8g00281 766 Gene3D - 349 549 IPR027417 -
Bach8g00281 766 Pfam GUCT (NUC152) domain 553 653 IPR012562 GO:0003723|GO:0004386|GO:0005524
Bach8g00281 766 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 112 712 - -
Bach8g00281 766 FunFam Nucleolar RNA helicase II 354 544 - -
Bach8g00281 766 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 156 332 IPR014001 -
Bach8g00281 766 CDD SF2_C_DEAD 358 475 - -
Bach8g00281 766 MobiDBLite consensus disorder prediction 732 746 - -
Bach8g00281 766 CDD GUCT_Hera 560 633 - -
Bach8g00281 766 Pfam DEAD/DEAH box helicase 149 321 IPR011545 GO:0003676|GO:0005524
Bach8g00281 766 Pfam Zinc knuckle 746 762 IPR001878 GO:0003676|GO:0008270
Bach8g00281 766 Gene3D - 730 765 - -
Bach8g00281 766 SMART helicmild6 386 466 IPR001650 -
Bach8g00281 766 ProSiteProfiles Zinc finger CCHC-type profile. 747 762 IPR001878 GO:0003676|GO:0008270
Bach8g00281 766 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 486 IPR027417 -
Bach8g00281 766 MobiDBLite consensus disorder prediction 101 120 - -
Bach8g00281 766 FunFam ATP-dependent RNA helicase RhlE 115 335 - -
Bach8g00281 766 MobiDBLite consensus disorder prediction 639 766 - -
Bach8g00281 766 SMART ultradead3 144 349 IPR014001 -
Bach8g00281 766 SMART c2hcfinal6 746 762 IPR001878 GO:0003676|GO:0008270
Bach8g00281 766 CDD DEADc 136 333 - -
Bach8g00281 766 MobiDBLite consensus disorder prediction 103 117 - -
Bach8g00281 766 MobiDBLite consensus disorder prediction 661 704 - -
Bach8g00281 766 Gene3D - 126 336 IPR027417 -
Bach8g00281 766 SUPERFAMILY Retrovirus zinc finger-like domains 734 765 IPR036875 GO:0003676|GO:0008270
Bach8g00281 766 MobiDBLite consensus disorder prediction 706 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00281 Bach-Chr8 1861424 1866415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00281 113 487 Eukaryotic Initiation Factors Gene Family AT1G72730 35.602 1.05e-64 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00281 - - pcin:129296705 1201.81