Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00278 ATCAGCCGCACCGTCCCTCTATCGCCGCGTCTCAATCCCGGCCACAGTGAAAGACTGAAAGCTAGCCATCGAACAACGCCGCTTCCTTTCCCCGCCCGATCCAGCGCCTTAATCTCTATCCATTTTGAAGACCATCTAGATTACTTCAGTTAGAATTCGCCTTTCTCATTTTCTAGTGAATCCATTTGGTTTTGCTCCAACTGCTTTGTGGGTTCGTGATTTTCTTCCAGTTCTGGTGGAGGGGTTGTGTTTTTAGCCTATCTCTTATTTCAGGCCCTATTTATTGTTGATGTTAATTTGTTGAGTTTACATACTTATGAATGGCGTGGAGGGAGCTGGGAAGAAAGAAGATATATGTGAATTTTGCTCGAGCTCTTACTACAATGTCATCTAGGCACGTGGCAGGGTCCATTTATGCATCTACCTTTGAAGATGCATCAAAATCCGTTTATACATTTTTAAGATGCTTGCCTGAGTGCATCAGCCACTCATCTATTGGAACAGCTGGATTATGCAATGGGGCAAAAGAACAGGGAATACGGTGCTTCCATGCAAGTGCAGAAGTCTGCGGTCGGAAAGATGATCAGGAATTTGGTTTGAAGACCCTAAAGAGGGGGAAGTTTGTCAAAAGGAACAATAGGAACCAGCCACCTGTTGAAGCTCCATATGTCCCTCGTAATCTGGGCAAAGCTATTAAATCCGTTCCTGATAAAACAATTGAAATATTTGAAGGCATGACCCTTGTTGAGCTTGCCAAGCGTAGTGGAAAGTCAGTTGCTTCCCTGCTGAATATTCTTGTAAATGTTGGGGAAAAGGTTGAATCAGAGTTTGAGTCTCTGAGCGTTGATCTTCTGGAGCTAGTTTCAATGGAAATCAGCCTCAATGTTAAGAGGCTGCATTCTTCTGAAGGTGCAGAAATTTTACCACGTCCACCAGTTGTAACAGTCATGGGTCATGTTGATCATGGTAAAACTTCTCTTCTAGATGCTTTGCGTCAGACATCAGTGGCAGCCAAGGAAGCTGGAGGCATAACTCAGCATGTTGGTGCCTTTGTGGTGGCCATGCCTTCAGGAGCATCAATTACATTTCTTGACACCCCTGGACATGCTGCATTTAGTGCAATGCGGGCAAGAGGTGCAGCAGTCACAGATATAGTTGTGCTAGTTGTGGCTGCAGATGATGGAGTAATGCCACAAACTCTTGAAGCCATGTCCCATGCAAAAGCAGCTAATGTACCGATTGTGGTAGCCATTAATAAATGTGATAAACCAGGTTCAAATCCTGAAAGAGTAAAACTGCAGCTAGCTTCAGAGGGCCTAATGCTGGAGGAGATGGGTGGGGATATTCAAGTGGTTGAAGTTTCAGCAATTAAGAAAATTGGACTGGATAAACTGGAGGAAGCTTTGCTTCTTCAGGCAGAAATGATGGATCTGAAATCACGAATTGATGGGCCTGCTCAAGCCTATGTGGTGGAAGCAAGACTTGACAAAGGACGGGGTCCGTTGGCTACTGCCATAGTGAAGGCAGGGACTCTCGCTTGTGGCAAGCATGTTGTTGTGGGCTCAGAGTGGGGTAGAATAAGGGCTGTTAGAGATATGGTAGGGAAGTTGACTGAGAGAGCAACACCTGCAATGCCTGTTGAGATTGAAGGGCTTCGGGGGCTTCCTATGGCTGGTGATGATATTGTTGTTGTTGATAGTGAGGAGCGAGCTCGAATGCTAAGCGCTGGTAGGAAAAGGAAATCTGAGAAGTATAGACTTACAAAGATGAACGAGGAAAAAACTGAGCTTGTGGAATCATCAGAGGAGGTTTCACAGGCAGTCGAACTGCCAATAATTGTAAAAGCAGATGTACAGGGCACTGTTCAAGCAGTCACAGACGCATTGAGAACTTTAAGTAGTCCTCAGGTTTTCGTGAATGTTGTCCATGTTGGTGTAGGGCCTATTTCTCAATCTGATGTGGACCTAGCACAGGCTTGTGGTGCGTGTCTAGTTGGATTCAATGTGAAGAGTCCACCTAGTTCTGTCAGTCTGGCCGCATCTCAAGCGAATATAAAGATAAAGCTGCACCAGGTGATTTACCACCTATTGGAGGACATAGGCAATTTGATAATAGAGAAGGCACCTGGGACATTAGAGACCCAGGTAGCTGGGGAGGCAGAGGTGCTGAATATCTTTGAGATCAAAGGGAGGAGCAGGTCCGATGAAGCTGTGAAGATAGCTGGTTGTCGGGTCATTGATGGTAATGTGATAAAATTAGCAACCATGAGGCTGCTGAGGAGTGGGGAAGTCATGTTTGAAGGGCCATGTGCATCTCTTAAGCGGGAGAAGCAAGATGTGGAGACAGTGAAGAAGGGAAATGAATGTGGACTTGTAATCCAGGAGTGGAATGATATTCAGATTGGAGATGTCATCCAGTGTTTGGAACAAGTCGTAAGGAAACCCAAGTTCATTAAGTCACAGAGTGGAGCTGTTCGTATTGAGTGCTGATACTAACAATTTTTTGAACACACTATCAGGCCTCCCTTCCCTATTTCACAATTAAGACAAGGGAAAATTTTGTCATATCATAGTTATATGTTGAAACTCGAATAAGAAAAATTAACATAGAAACTCCATTACTGTACGCAGGGAAATGTTGTATTTGGGTATCGTTAGGGAAATTTTGGAAGAATAATGGTGATTTTAT 2688 0.4446 MAWRELGRKKIYVNFARALTTMSSRHVAGSIYASTFEDASKSVYTFLRCLPECISHSSIGTAGLCNGAKEQGIRCFHASAEVCGRKDDQEFGLKTLKRGKFVKRNNRNQPPVEAPYVPRNLGKAIKSVPDKTIEIFEGMTLVELAKRSGKSVASLLNILVNVGEKVESEFESLSVDLLELVSMEISLNVKRLHSSEGAEILPRPPVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHVGAFVVAMPSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPIVVAINKCDKPGSNPERVKLQLASEGLMLEEMGGDIQVVEVSAIKKIGLDKLEEALLLQAEMMDLKSRIDGPAQAYVVEARLDKGRGPLATAIVKAGTLACGKHVVVGSEWGRIRAVRDMVGKLTERATPAMPVEIEGLRGLPMAGDDIVVVDSEERARMLSAGRKRKSEKYRLTKMNEEKTELVESSEEVSQAVELPIIVKADVQGTVQAVTDALRTLSSPQVFVNVVHVGVGPISQSDVDLAQACGACLVGFNVKSPPSSVSLAASQANIKIKLHQVIYHLLEDIGNLIIEKAPGTLETQVAGEAEVLNIFEIKGRSRSDEAVKIAGCRVIDGNVIKLATMRLLRSGEVMFEGPCASLKREKQDVETVKKGNECGLVIQEWNDIQIGDVIQCLEQVVRKPKFIKSQSGAVRIEC 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00278 722 NCBIfam translation initiation factor IF-2 130 705 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Bach8g00278 722 CDD IF2_eIF5B 205 369 - -
Bach8g00278 722 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 130 717 IPR015760 -
Bach8g00278 722 FunFam Translation initiation factor IF-2 606 709 - -
Bach8g00278 722 SUPERFAMILY Translation proteins 376 459 IPR009000 -
Bach8g00278 722 NCBIfam small GTP-binding protein domain 205 358 IPR005225 GO:0005525
Bach8g00278 722 CDD mtIF2_IVc 611 700 - -
Bach8g00278 722 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 202 372 IPR000795 GO:0003924|GO:0005525
Bach8g00278 722 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 495 611 IPR036925 -
Bach8g00278 722 Gene3D Translation factors 375 494 - -
Bach8g00278 722 Gene3D - 498 603 IPR036925 -
Bach8g00278 722 Pfam Elongation factor Tu GTP binding domain 207 364 IPR000795 GO:0003924|GO:0005525
Bach8g00278 722 Gene3D - 200 374 IPR027417 -
Bach8g00278 722 FunFam Translation initiation factor IF-2 498 609 - -
Bach8g00278 722 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 372 IPR027417 -
Bach8g00278 722 Pfam Translation-initiation factor 2 484 593 IPR023115 -
Bach8g00278 722 Hamap Translation initiation factor IF-2 [infB]. 8 708 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Bach8g00278 722 FunFam Translation initiation factor IF-2 199 374 - -
Bach8g00278 722 SUPERFAMILY Translation proteins 606 707 IPR009000 -
Bach8g00278 722 CDD IF2_mtIF2_II 378 473 IPR044145 -
Bach8g00278 722 Gene3D Translation factors 605 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00278 Bach-Chr8 1841937 1847291 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00278 193 686 Eukaryotic Initiation Factors Gene Family AT1G76810 27.944 4.26e-29 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00278 K02519 - qsa:O6P43_014736 1055.05