Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00273 CCGAGCCCTACTCTTTTCTCTCGTGAAGTAAAAATGGGAATAAAGGGTTTAACAAAGCTTTTAGCCGACAATGCGCCCAAATCCATGAAAGAGCATAAATTTGAGAGCTATTTTGGTCGTAAGATTGCCATTGATGCCAGTATGAGCATCTATCAGTTCCTAATTGTTGTGGGAAGAAGTGGGACTGATATGCTGAAAAATGAGGCCGGTGAAGTTACTAGTCATTTGCAAGGAATGTTTACACGGACAATCAGACTTCTAGAAGCGGGAATGAAACCAGTATATGTTTTTGATGGGAAGCCCCCAGATTTGAAGAAACAAGAGCTAGAAAAACGTTATTCCAAGAGGGCTGATGCTAGCACGGATTTGACAGAAGCCATGGAGGCTGGTAATAAAGAAGACATTGAAAAATTCAGCAAACGGACTGTGAAGGTTACAAAGCAGCATAATGAAGACTGTCAAAGACTTTTAAGACTTATGGGAGTGCCTGTTATCGAGGTTTATGCTGTGGCTTCTGAAGACATGGATTCCTTAACGTTTGGAGCTCCGAGATTTCTTCGCCATTTAATGGATCCTAGCTCAAAAAAAATCCCTGTGATGGAGTTTGAAGTTGCAAAGGTTTTGGAGGAGCTGAATCTTACCATGGATCAATTCATTGACTTATGCATCCTCTCTGGTTGTGACTACTGTGATAGCATTCGAGGGATTGGGGGACAAACTGCCTTGAAGCTCATACGCCAATATGGCTCTATAGAGAATATACTGGAGAACGTAAACAGAGAGAGGTACCAAATACCAGATGATTGGCCATATCAGCAGGCTCGTCAGCTTTTTAAAGAACCATTAGTTATAACTGAAGAAGAGCAACTTGATCTTAAGTGGACTGCTCCAGACGAAGAAGGTTTGCTTACATTTCTGGTAAATGAGAATGGGTTCAACAGTGATAGGGTGACAAAGGCAATAGAGAAAATAAAAGCAGCAAAGAACAAGTCATCACAGGGACGATTGGAGTCATTTTTTAAGCCAGCAGCAAATCCATCTGCACCCATTAAACGGAAGGAAGTACCTGGGAATATTGCTAAAGGGACAAACAAGAAGACGAAGGCCAGTGGTGGTAAGAAGAAGAAATAG 1131 0.4173 MGIKGLTKLLADNAPKSMKEHKFESYFGRKIAIDASMSIYQFLIVVGRSGTDMLKNEAGEVTSHLQGMFTRTIRLLEAGMKPVYVFDGKPPDLKKQELEKRYSKRADASTDLTEAMEAGNKEDIEKFSKRTVKVTKQHNEDCQRLLRLMGVPVIEVYAVASEDMDSLTFGAPRFLRHLMDPSSKKIPVMEFEVAKVLEELNLTMDQFIDLCILSGCDYCDSIRGIGGQTALKLIRQYGSIENILENVNRERYQIPDDWPYQQARQLFKEPLVITEEEQLDLKWTAPDEEGLLTFLVNENGFNSDRVTKAIEKIKAAKNKSSQGRLESFFKPAANPSAPIKRKEVPGNIAKGTNKKTKASGGKKKK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00273 365 SMART HhH_4 204 237 IPR008918 GO:0003677|GO:0003824
Bach8g00273 365 Pfam XPG N-terminal domain 1 107 IPR006085 GO:0004518
Bach8g00273 365 CDD PIN_FEN1 4 315 - -
Bach8g00273 365 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 82 101 IPR006084 -
Bach8g00273 365 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 28 42 IPR006084 -
Bach8g00273 365 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 207 222 IPR006084 -
Bach8g00273 365 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 150 170 IPR006084 -
Bach8g00273 365 SMART 53exo3 29 282 IPR002421 GO:0003677
Bach8g00273 365 CDD H3TH_FEN1-Euk 205 273 - -
Bach8g00273 365 SMART xpgineu 147 202 IPR006086 GO:0004518
Bach8g00273 365 FunFam Flap endonuclease 1 1 156 - -
Bach8g00273 365 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 202 335 IPR036279 -
Bach8g00273 365 Gene3D - 202 269 - -
Bach8g00273 365 MobiDBLite consensus disorder prediction 318 365 - -
Bach8g00273 365 FunFam Flap endonuclease 1 202 269 - -
Bach8g00273 365 SUPERFAMILY PIN domain-like 2 217 IPR029060 -
Bach8g00273 365 SMART xpgn3 1 108 IPR006085 GO:0004518
Bach8g00273 365 Pfam XPG I-region 156 217 IPR006086 GO:0004518
Bach8g00273 365 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 156 357 IPR006084 -
Bach8g00273 365 Gene3D - 2 201 - -
Bach8g00273 365 Hamap Flap endonuclease 1 [fen]. 1 330 IPR023426 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00273 Bach-Chr8 1806398 1810214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00273 1 342 Core DNA Replication Machinery Family AT5G26680 82.173 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00273 K04799 - cave:132187694 620.157