Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00271 ATGGGAAGACACTCTTGCTGTTACAAGCAGAAGCTAAGGAAGGGCCTCTGGTCTCCAGAGGAAGATGAGAAGCTTTTGAATTATATCACCAAACATGGCCATGGATGTTGGAGCTCTGTCCCAAAACTTGCTGGCTTGCAGAGGTGTGGCAAGAGCTGCAGGTTGAGGTGGATAAACTACCTTAGGCCTGATTTGAAGAGAGGAGCATTCTCACAGCAGGAAGAGAATTTGATAATTGAACTGCATGAAGTCCTTGGCAACAGATGGTCTCAGATTGCAGCTCAATTACCAGGAAGAACTGACAATGAGATAAAAAATCTATGGAATTCCTGCCTCAAGAAGAAGCTTAGGCAAAGAGGCATTGACCCAAACACCCATAAACCTCTCTCTGAGGTTGAGGACGACAAGGACAAGCCACCCACAGCCGACAAAAGCAACCAGAAAGGCTCAGCGGGATCCAATGAGCTGAGTCTTGCAGCTGAGCCACCAAAACTAAAGCCAAGTTCAATGTTAATGTCTGCAGAACGATATCCACTTGAAGTTTCCTCCAGTTCCAGAATAAAAAATAGCAGCAGTTGCAGCAGCAATTTGACAAACACAACACACACCCAGAATTTAATTTTAGATAGGTTCGGTACCTGCCATGACAACTCTATGGCCAATTGCAGACCTTCTGATATGGTGGGCTATTTCCCTTTCCAGCAGTTGAACTATGGAGCAAATATTGGCCTCTCTGCAAATCCCAACACCTCTCTTTGCTTTATACCAAGCACCAGTTCTTGTCAGGTGATGTCAGAGCTTAATTCTAGTATCACTCCTCCTATGCTCCCTTCTGTGACAACCTCAATATTCTCAACTCCAACACATATCGTAAAGCCAACCGTTAGTCTTCAGTCTAATAATCCTTCTGTATCTTCGGGTCATGACATTAATGTGGTTCATAACTGGGAAGCCAGTACCTTCAGCAACAATGGAAGCAAAAGCAATGGAAGCAATAACAGTATCCAATTACAAAGCAGCACTAACTTCCTAGACAGTAGCACTTTAACATGGGGTCTGGCGGAGTCTGTGAAGGCATCAATTAAAGATAATCATATATCCTTACAAGGACAAGGAGAACAAGAAGAGATTAAATGGTCTGAATATCTCAACACTCCCTTCCTGCTTGGAACCTCAGTGCAGAATCAAACCTCTCAATGTATCTACAACGAGGTCAAACCAGAAACAGGCTTTATTGCAGATGAGTCAAGTACTACTTGGCACCATAGCCAGCACCAACCAGCTTTCCAAGCTTCAGATATATATACCAAGGATCTTCAAAGATTTTCGGTGGCTTTCGGACAAACCCTTTAG 1353 0.4375 MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQQEENLIIELHEVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNTHKPLSEVEDDKDKPPTADKSNQKGSAGSNELSLAAEPPKLKPSSMLMSAERYPLEVSSSSRIKNSSSCSSNLTNTTHTQNLILDRFGTCHDNSMANCRPSDMVGYFPFQQLNYGANIGLSANPNTSLCFIPSTSSCQVMSELNSSITPPMLPSVTTSIFSTPTHIVKPTVSLQSNNPSVSSGHDINVVHNWEASTFSNNGSKSNGSNNSIQLQSSTNFLDSSTLTWGLAESVKASIKDNHISLQGQGEQEEIKWSEYLNTPFLLGTSVQNQTSQCIYNEVKPETGFIADESSTTWHHSQHQPAFQASDIYTKDLQRFSVAFGQTL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00271 450 Gene3D - 11 67 - -
Bach8g00271 450 FunFam Myb transcription factor 11 67 - -
Bach8g00271 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bach8g00271 450 MobiDBLite consensus disorder prediction 119 143 - -
Bach8g00271 450 FunFam MYB transcription factor 68 140 - -
Bach8g00271 450 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Bach8g00271 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bach8g00271 450 CDD SANT 17 61 IPR001005 -
Bach8g00271 450 Gene3D - 69 146 - -
Bach8g00271 450 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach8g00271 450 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach8g00271 450 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bach8g00271 450 MobiDBLite consensus disorder prediction 119 170 - -
Bach8g00271 450 SMART sant 66 114 IPR001005 -
Bach8g00271 450 SMART sant 13 63 IPR001005 -
Bach8g00271 450 CDD SANT 69 109 IPR001005 -
Bach8g00271 450 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach8g00271 450 PANTHER MYB DOMAIN PROTEIN 55 1 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00271 Bach-Chr8 1788746 1790361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00271 1 450 MYB Transcription Factor Family AT1G09540 47.210 1.75e-124 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach8g00271 Myb_DNA-binding 3.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00271 K09422 - qsa:O6P43_007365 628.246