Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00252 CGACAATGCCTTTGGGTAAGTACTACTGCGACTATTGCGACAAGCAATTTCAAGACACCCCAGGTGCTCGCAAACGACATCTTCAGGGTATTCAACATCTCCGGGCCAAAGCTCTTTGGTACGACTCCTTCAAACTTCAAGATCCTGAGCGACCAGGGAAAGGAGTTTGCAACCGCTTCGTCAAAACGGGATTTTGCCAGTACGGCGATTCCTGCAAATATTTTCATCCAAAGAACTTGCCCGATGTGAACCCTCACCTAGGAGGAGGACTATTTGGTAAAACACACTCGACGATGACTATGGGAAGTCCAGCACCTGGGAATGTTGGAATGTCATGGGGCAACCTACCTCCATCGCTGAAGCCTCCTCCCGAGGGGGGATGTCCCCCACTTCCCTTTGTGGATTGGGGATAGATGTGCCTATAATTCTAGTCCTTGATCAACAGGAACGAATATTTTCATTGAGGTGTTTGGATGAGCTACATGGATTAGTGTTATGTGCTATTCTGGTTTCCCTGTGGTCATACATCTTTATCTCTTCGGACATTGTAATATTAGGTCACAGAGAAAAGTTTTTTTTTTTGCTTTGCAAACATTTATACAGCAATTGCC 611 0.4583 MPLGKYYCDYCDKQFQDTPGARKRHLQGIQHLRAKALWYDSFKLQDPERPGKGVCNRFVKTGFCQYGDSCKYFHPKNLPDVNPHLGGGLFGKTHSTMTMGSPAPGNVGMSWGNLPPSLKPPPEGGCPPLPFVDWG 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00252 135 Gene3D - 46 101 - -
Bach8g00252 135 SMART ZnF_U1_5 3 38 IPR003604 GO:0003676|GO:0008270
Bach8g00252 135 PANTHER NUCLEASE-RELATED 1 135 - -
Bach8g00252 135 Pfam U1 zinc finger 5 37 IPR013085 GO:0008270
Bach8g00252 135 FunFam Zinc finger CCCH domain-containing protein 3 3 48 - -
Bach8g00252 135 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 54 76 IPR000571 GO:0046872
Bach8g00252 135 SUPERFAMILY CCCH zinc finger 51 77 IPR036855 GO:0046872
Bach8g00252 135 ProSiteProfiles Zinc finger C3H1-type profile. 49 77 IPR000571 GO:0046872
Bach8g00252 135 SMART c3hfinal6 49 76 IPR000571 GO:0046872
Bach8g00252 135 SUPERFAMILY beta-beta-alpha zinc fingers 4 43 IPR036236 -
Bach8g00252 135 Gene3D Classic Zinc Finger 3 45 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00252 31 85 C3H Transcription Factor Family AT1G04990 41.818 1.58e-06 44.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach8g00252 zf-U1 7.6e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00252 K13152 - cave:132171295 189.119