Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00236 ATGTTCCTGATGCTGCTTCTGAAAAAGAGCTGTCATGTCCATAGCAATTTAATTGGTGAAGATGTTCCTGATGCTGCTTCTGAGAAAGAGCTGGGTAATGAATACTTCAAGCAGAAGAAATTTAAGGAAGCTATTGACTGCTATTCAAGAAGCATTGCCTTGTCACCAACAGCTGTGGCATATGCAAATAGGGCAATGGCCTATATCAAACTTAGAAGGTTCCAAGAGGCTGAGGATGACTGCACAGAAGCCTTAAATCTAGATGATCGTTACATAAAGAATGCATGGAAGATGGAGTTTGCCCTGAGATTGGAACCTAACAATCAAGAAATCAAGAAACAGTATGCTGATTCCAAGTCTTTGTATGAGAAAGCAGTTATTCAGAAAGCATCTGGGGCTCCGAGAAGCTCTTTAGAGGGAACTGAAAAGAGTAATCACAGGATTGGTAAGCAGGACATGAAGGCATCTCTTCAGCAGCTTGCTTCTCGAGCAGCTTCTCGTGCCATGGCTGAAGCTGTAAGAACATATCGCCACCAACTTCAGCTTATCAGTTTGAGGTCTCATGGCGAGGGCTATTCCACATTGTTGTACAATCATTTGTGCTCTGATTTCTGTTTCAATTTCAAGCACATAGCCAAATTGACAAGATCAAGGATTTTTTTTGCTGTATCTCCTAAGGAATTACCGCATGTTTTCAAAAATGCCTTATCTGCTGCCCTGCTAATCGACATTATCAAACGTGTTGCATCATTTTTCACTGAAGATATGGATTTGGCTGTCAGCTATATAGAGCATTTGACCAAGGTTGATCATGTGTCTTTCATCGACTGTTAA 834 0.4113 MFLMLLLKKSCHVHSNLIGEDVPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYIKLRRFQEAEDDCTEALNLDDRYIKNAWKMEFALRLEPNNQEIKKQYADSKSLYEKAVIQKASGAPRSSLEGTEKSNHRIGKQDMKASLQQLASRAASRAMAEAVRTYRHQLQLISLRSHGEGYSTLLYNHLCSDFCFNFKHIAKLTRSRIFFAVSPKELPHVFKNALSAALLIDIIKRVASFFTEDMDLAVSYIEHLTKVDHVSFIDC 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00236 277 ProSiteProfiles TPR repeat profile. 25 58 IPR019734 GO:0005515
Bach8g00236 277 Gene3D Tetratricopeptide repeat domain 16 121 IPR011990 GO:0005515
Bach8g00236 277 SMART tpr_5 25 58 IPR019734 GO:0005515
Bach8g00236 277 SMART tpr_5 59 91 IPR019734 GO:0005515
Bach8g00236 277 Pfam Potential Monad-binding region of RPAP3 208 274 IPR025986 -
Bach8g00236 277 Pfam Tetratricopeptide repeat 58 88 IPR001440 GO:0005515
Bach8g00236 277 Pfam Tetratricopeptide repeat 29 57 IPR001440 GO:0005515
Bach8g00236 277 SUPERFAMILY TPR-like 25 116 IPR011990 GO:0005515
Bach8g00236 277 PANTHER OS05G0129900 PROTEIN 217 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00236 Bach-Chr8 1554319 1556660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00236 29 102 U-box Gene Family AT3G07370 40.000 3.40e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00236 K23002 - fve:101312741 232.646