Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00234 TCTCTCTCCATTTCCATCGAGGTGGTTCCTTTTCCCCAGGTTTTCTTGGAAAAGAAAAGCCAGGTCTGGTCTCTTTCCAGGTGCCGTGATAACTTTTTCTTCCTCTTCTTCAAGGCTCACTACTTCAACACTGTCTCTTCCTTCGTTCTTTACTTCCCCTCTCTTCCTCTCTCTATTCGTAAGCAAAATCATATGCAAAATATAATATATAAATATATGTGAAGCTCTCCGATATATACCGCCAAGAACTTGTTCTTATCCCCATGCATATTCTGTAATATGATGATGATTCTTCAAGTTTAAGTAATTGCGGCTTCCAGTGGTCGTAAGAAACTAATGGGTAGAGCTGTATCTGATGTTTTCATTGGAAAATATTGCTTGGTTATCTGATCTTTGTTCCAATTCTGTTTTAAGCAAACGGGTGTCTCTTTTTCTTTAAAAATCGGAAAGCTTACAACTTGTTCGAGATATTGACTCCGAATCGAGAACTGGATTCATGTACTCTCTTGTATCTTACCCAGATGGTGTTGTTAGAGTTGGCAGCGTTCCTGTAACTGCTACGCCTACTACTACTGCTCAATTGCATCATGGACAGGTAGCCAATAACTATCTCCAGCTCGAACAGGATAGAACCGGGTCAGATATGTCGGATCGGCTGCTCAAGACCCAGATCGCCAGTCATCCTCTTTATCCAAATTTAATATCTGCATACATAGAATGCCAAAAGGTAGGAGCTCCACCAGAACTGGCGTCCCTTCTCGAAGAAATAGGCCGCGAAAGCCACCCCACCAATGTTTCCCGTGAGATAGGGGACGATCCTGAGCTTGACGAGTTCATGGAATCATACTGCAAAGTTCTTCGTAGATACAAGGAGGAGCTCTCCAAGCCTTTCGACGAAGCGACCTCGTTTTTGAACAATATCCAATCCGAACTAAGCAACCTTTGTCAGGGAACATTAACAAAATCATCGGACTATCGCTCAGATGAAGCAGTCGGGACTTCTGAGGAGGAGTTAAGTTGTGGGGAGGCAGAAACACTTGAAAGTCGTGAATCTTCTTGCTGTCATCCAGGTGATCAAGAGCTAAAAGAAATGCTCCTTCGCAAGTACCGTGGCTACCTCAGCAGTTTGAGAAAGGAATTCTTAAAGACACGGAAAAAGGGTAAGCTACCAAAGGATGCAAGGATGGCTTTACTGGACTGGTGGAACACCCACTACAGATGGCCATATCCTACGGAAGAGGAAAAATTGAAGCTTTCAGATATAACTGGACTAGATCAAAAGCAAATCAATAATTGGTTCATCAATCAGAGGAAACGGCATTGGAAACCTTCTGAAGATATGAAATTTGCCATTATGGAGGGTGTAAATGGTGGCAGCACAGGAGGAGGAGGACCTATGTTCATTGATTCTGGAGGTGGTCCTCAATTTGATGATATTTGAAAGTTGCGTATACTTCTGTGATCCCATCTACTTGTACCTTACGCTACAGTAATGTTTACGTTCCTTTTGTCATTTGCTTGCATAATCATACCATGTAGCAAATATCAGTCACCCTCTTATGACAGTGCTATGCCAAAAGCAAGGAGAAAGAGTGAATGATAATGTCTTTTAGAAAACTGTTCTCAAAGTGGAGTGTTTCACTAGAATGAATTTAACTTAGTTCTCGAGGTACTCAAATTTGTTTTTTGTAGACTTGAATAATGTAATGTATAATACCGGCACACATGGTGATACTTTCCCTGTGTTTAACTATTTTT 1758 0.4152 MYSLVSYPDGVVRVGSVPVTATPTTTAQLHHGQVANNYLQLEQDRTGSDMSDRLLKTQIASHPLYPNLISAYIECQKVGAPPELASLLEEIGRESHPTNVSREIGDDPELDEFMESYCKVLRRYKEELSKPFDEATSFLNNIQSELSNLCQGTLTKSSDYRSDEAVGTSEEELSCGEAETLESRESSCCHPGDQELKEMLLRKYRGYLSSLRKEFLKTRKKGKLPKDARMALLDWWNTHYRWPYPTEEEKLKLSDITGLDQKQINNWFINQRKRHWKPSEDMKFAIMEGVNGGSTGGGGPMFIDSGGGPQFDDI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00234 314 ProSiteProfiles ELK domain profile. 195 215 IPR005539 GO:0003677
Bach8g00234 314 SMART ELK_2 195 216 IPR005539 GO:0003677
Bach8g00234 314 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 57 286 - -
Bach8g00234 314 Gene3D - 214 285 - -
Bach8g00234 314 ProSitePatterns 'Homeobox' domain signature. 253 276 IPR017970 GO:0000981|GO:0006355
Bach8g00234 314 Pfam Homeobox KN domain 235 274 IPR008422 GO:0003677|GO:0006355
Bach8g00234 314 SMART KNOX2_2 100 151 IPR005541 GO:0003677|GO:0005634
Bach8g00234 314 Pfam ELK domain 195 216 IPR005539 GO:0003677
Bach8g00234 314 ProSiteProfiles 'Homeobox' domain profile. 215 278 IPR001356 GO:0003677
Bach8g00234 314 SMART HOX_1 217 282 IPR001356 GO:0003677
Bach8g00234 314 SUPERFAMILY Homeodomain-like 218 285 IPR009057 -
Bach8g00234 314 Pfam KNOX2 domain 104 150 IPR005541 GO:0003677|GO:0005634
Bach8g00234 314 CDD homeodomain 219 279 IPR001356 GO:0003677
Bach8g00234 314 Pfam KNOX1 domain 55 96 IPR005540 GO:0003677|GO:0005634
Bach8g00234 314 SMART KNOX1_2 53 97 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00234 Bach-Chr8 1536539 1540891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00234 45 292 Homeobox Transcription Factor Family AT1G23380 55.906 1.18e-90 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Bach8g00234 KNOX2 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00234 - - qsa:O6P43_011033 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00234 8 1536539 1540891 Bach1g03152 1 40960419 40964988 BWGD
Bach8g00234 8 1536539 1540891 Bach8g00234 8 1536539 1540891 ECH