Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00219 ATGGTAAGTGGAGGGAAGGTTAATAGCAAACGCAATTTCAGGGGAAGAGTTCGGTCAAAGGGAAGGGATTCTGATGATTCGGATGAGGACTATGTAGTTTCAGATGAAGGTAGAGATGTCTCTGATGCTTCAGAGGACTATTGTTCTTCTTTAGATGGATGTGCATCAGAGGAGAGTTTTGATTGTTTTGTAGATGAAGAGGAAGAGGAAGGGGAGGAAATTGAAGGATTAAGGAAAACTAATAGATCAAAGGCAAAAAATGGTTTTTATGGTCAGCGAAAAGGGGGTGGTAAGACATCAAAAAAGGGGGGAAAGACTACATGTGAGCAACAAGTCGAAGAAGAGGAGGAAGAAGACAAAGTAGATGAGGATGAGGATGAATACGAGGAGGAAGACGATGAGGATTTTGATATTGATGATGATGAGGAATTTACACCTGAGGAAGAAGAGTATTCAGATGATGAAGAAGAAATGAGGGGGAGAAAGAAGAAAAGTAACAGCATGAAAATGGGCAAGAAGGTATTGCAGAAAAGAGTCTCTGTGACTTCTACTAGAGGTCGAAAGAGGAGGAGTTTGGGAGTTGCAAGGAAGCCCTTGAAAAGGAAAAGAAGGAATGCAGGCTTGAGGAGGAAAGTAAGATGTGATGATGATGAGGATGATTTTATAGATAATGGCTCCAATGTCAGAACAAAGAGCAAGAAAAGATCAGTCCCAAAAAAGAGAAGACTTGTTGTGGATTCTGATTCAGACTGTGTGTCTTCATCTGATTACGAGTTTACCATCTCGGAGGAAGAGAGAGAACAGGTGAGAGAAGCTGAGGAATTATGTGGAAGTTTGAGACCTAACTTGAGGAGTTCATTGCTTATGATGAAAAATGAAGAGGATGGTGTTCATGAAGATCTACATCGACAAAGGAAGCCTCCATGTCGGAAGGGTAAGGAAAAGATAGAAGAACCTCAAGGCAAAAAAGGTAAGGAAAAGGTTGAGGATTTAAAAAGTGAGGTGGTAAAGCAAGTCTGTGGGATTTGTCTGTCAGAGGAAGATAGAAGAAGAGTAAGGGGGGTGCTAAATTGCTGCACCCACTATTTTTGTTTTGCTTGCATTATGGAGTGGTCGAAGGTGGAAACTCGTTGCCCTTTGTGTAAGCAGAGATTCACAACAATTAGTAAGCCTGGACGAACAACACCAGGGGTTGATTTGAGAGAAGTGGTGGTACAAGTACCTGAGCGTGATCAGGTTTATCAGCCTTCTGAAGAAGAACTCAGGAGCTATATTGATCCATATGAATCTGTGATTTGTTCAGAGTGCCATCAAGGCGGAGATGATGCCCTCATGTTACTATGTGATCTCTGTGATATACCTGCGCACACATATTGTGTTGGTCTTGGGCGGGAAGTACCTGATGGCAATTGGTATTGTGATGGTTGTAGACCAGTTGCTTTGGGATCTTCTCGTTCCCAAGCTCAAGAACAGGTGTCTGATCCAAGGGTTACACTCCAGAGCTTGCCTGGTAGACCATCACCTGCGTTACATGTGAGAGAAAGCATAGATCTTAACTTGATGTCTCCACCAAGTACGTATTTTGGTCAAGCGTTTGGGAATATGTCGGCTTCAAGGTTCTCTAACAGAAGTGTGGAAGGAGCGTCTCCACCATCTGGAGGAGGGGCAACAACTTTAACAGGGAGACGCTGGATACAACGTCAAATTCAACAGCTTCTTTCAATGGATAGAATGAATTCTAGAATTGACAGAATTAATGGTATCTCAGCTACCAGTTCAAATGGTAACTTGTATAGCTCTCAAATTGATCAGAGTATGGAAACAGTAACTGAACATACGAGGATACAGGATGTGGGAACATCATATCACACATTCCTTGATGATAGATTATGCAATAATTCCTCTCCTTTAATGCAGAATGGGGATCTTTTACCCACGAGAATAAGCGATTCAAGAAGGACACCACTTCGAGATTCAACTACATTTACTGACAGAACTGTGAATGGGGCAGTATGGCCTGGTCTTGTGGGAACACCCCCAGCGCAAGTATCAGATTATGAACAAGTCAATCAGTTGAGAAGCAGATCAAACACTGTTACTGATATTTCCCCTGCTGTCAGAGAAGAGAGTCACATTGCAAAGGAACAGTTACAGTCAATGGTTAGGAGCCACCTGAAGAGCTTGTCACAAGATATTAGTTTAAGCAGCGGTACCTTTAAGGACATTGTTAGGAGTTGTACACACACCATACTAGCAGCGTGCGGTTTTGAGCACAAGAAGAGTGAGGTTTGCTTTATGCCACCACCGTCCGTCTGCTCCCACAACATTCAAGTAATGGCCAGTGGACAAACGAGTCTGCTTCAAGGCTGCTGCTCATCTTGCTTTGATTCTTTTTTAGTAGATGTGGTGAAGAGGATTATGGACACAAAATTGTCGTCAGAATGGTTACGGTTAGGTCTTTAGCCATTATTGAAATGTGTCCAGAGACACACCTTTTTGTTAGGAGTTCAGTAAGACAAGAAAATGCCATTTATTTGTCTATAATTATATTAATGATTCGCTTAACGTTGAACAGCAA 2578 0.4224 MVSGGKVNSKRNFRGRVRSKGRDSDDSDEDYVVSDEGRDVSDASEDYCSSLDGCASEESFDCFVDEEEEEGEEIEGLRKTNRSKAKNGFYGQRKGGGKTSKKGGKTTCEQQVEEEEEEDKVDEDEDEYEEEDDEDFDIDDDEEFTPEEEEYSDDEEEMRGRKKKSNSMKMGKKVLQKRVSVTSTRGRKRRSLGVARKPLKRKRRNAGLRRKVRCDDDEDDFIDNGSNVRTKSKKRSVPKKRRLVVDSDSDCVSSSDYEFTISEEEREQVREAEELCGSLRPNLRSSLLMMKNEEDGVHEDLHRQRKPPCRKGKEKIEEPQGKKGKEKVEDLKSEVVKQVCGICLSEEDRRRVRGVLNCCTHYFCFACIMEWSKVETRCPLCKQRFTTISKPGRTTPGVDLREVVVQVPERDQVYQPSEEELRSYIDPYESVICSECHQGGDDALMLLCDLCDIPAHTYCVGLGREVPDGNWYCDGCRPVALGSSRSQAQEQVSDPRVTLQSLPGRPSPALHVRESIDLNLMSPPSTYFGQAFGNMSASRFSNRSVEGASPPSGGGATTLTGRRWIQRQIQQLLSMDRMNSRIDRINGISATSSNGNLYSSQIDQSMETVTEHTRIQDVGTSYHTFLDDRLCNNSSPLMQNGDLLPTRISDSRRTPLRDSTTFTDRTVNGAVWPGLVGTPPAQVSDYEQVNQLRSRSNTVTDISPAVREESHIAKEQLQSMVRSHLKSLSQDISLSSGTFKDIVRSCTHTILAACGFEHKKSEVCFMPPPSVCSHNIQVMASGQTSLLQGCCSSCFDSFLVDVVKRIMDTKLSSEWLRLGL 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00219 820 ProSiteProfiles Zinc finger RING-type profile. 340 382 IPR001841 -
Bach8g00219 820 MobiDBLite consensus disorder prediction 182 208 - -
Bach8g00219 820 MobiDBLite consensus disorder prediction 209 230 - -
Bach8g00219 820 SMART PHD_3 432 477 IPR001965 -
Bach8g00219 820 SUPERFAMILY FYVE/PHD zinc finger 401 478 IPR011011 -
Bach8g00219 820 MobiDBLite consensus disorder prediction 296 327 - -
Bach8g00219 820 MobiDBLite consensus disorder prediction 59 73 - -
Bach8g00219 820 ProSiteProfiles Zinc finger PHD-type profile. 430 479 IPR019787 -
Bach8g00219 820 Pfam Ring finger domain 339 382 IPR001841 -
Bach8g00219 820 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 409 485 IPR013083 -
Bach8g00219 820 Pfam PHD-finger 432 478 IPR019787 -
Bach8g00219 820 SMART ring_2 340 381 IPR001841 -
Bach8g00219 820 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 316 399 IPR013083 -
Bach8g00219 820 MobiDBLite consensus disorder prediction 1 242 - -
Bach8g00219 820 CDD RING-HC_Topors 338 385 - -
Bach8g00219 820 ProSitePatterns Zinc finger RING-type signature. 359 368 IPR017907 -
Bach8g00219 820 Coils Coil 111 134 - -
Bach8g00219 820 SUPERFAMILY RING/U-box 339 388 - -
Bach8g00219 820 PANTHER F18C1.6 PROTEIN 1 810 - -
Bach8g00219 820 MobiDBLite consensus disorder prediction 111 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00219 Bach-Chr8 1440037 1442800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00219 427 476 C2H2 Transcription Factor Family AT3G01460 48.077 2.56e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach8g00219 PHD 2.4e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00219 - - gmx:100791422 863.218