Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00213 ATGTCGTGTGAGCGGCTGATTGAAGGTCCAGGTATAATGCCGGAAACATTGTCGCCGTTGGCGTGTCATCCATTCTTCATTTTTGAGGAATTGCCGATAGCCACTATCGTATCCGTGTCCCGACCAGAGACCGGAGATATTAGCCCAATCCTTCTTTCTTATACTATTGACTTGCAATATAAACAGGCAAGCTCCCTCTTCTTTTCTTTATCAACATCGCAAGTTCTCTATTTACATTTCGCTTTGAAGAAACGTGCACTTATTGAAGAATTTCATGATAAACAAGAGCAGGTGAAAGAATGGCTTCAAAGCCTCGGAATAGTGGATCAAACGGCAATGGTGCAGGACGATGAAGAACCTGATGATGGAACTGTGCCTTTAAATCATGAAGACAGTGTTAGAAGCAGATATGTTCCATCCATTGCTGCTCTACCAATCATTCGTCCATCCTTAGGAGGGCAGCAGTCAGTTGCAGATAAAGCAAAAGTTGCAATGCAGGGTTATTTGAATCATTTTCTAGGAAGTATAGATATTGTGAATTCTCGAGAGGTCTGTAGATTTTTGGAGGTCTCCAAGTTATCCTTTTCACACGAGTATGGTCCAAAACTGAAAGAGGGCTATGTAATGGTGAACCATCTATCATCTCGGGATTCAGATGTAACATGCTTACCATGTGATTGGTTTAGCTGCTTTACTAGCAACTGGCACAAGGTATGGGCTGTTTTAAAACCTGGGTTTTTGGCCTTGCTGGATGATCCTTTGGACAACAAACCACTAGACGTAATTGTTTTTGATGTCCTCCCATCCTCAAATGGAAATAAAGGATACCAAGTATCTTTAGCTAATCATATAAAGGAAGGCCATCCTTTGCAGTACACATTTCAGGTTACTGGTGGAAATCGGAGCATAAAATTGAGAACTACCAGTTGTGCTAAAGCTAAAGATTGGGTTCTTGCAATTAATGGAGCTGGTCTAAGACCTTCAGAGGGTTGGTGTCACCCTCATCGATTTGGTTCCTTTGCTCCCGTAAGAGGTTTGGCTGAAGATGGCAGCCAAGCACAATGGTTTGTTGATGGAGAGGCAGCATTTGCAGCAATTGCTTCTTCAATTCAAGAAGCAAAGTCAGAGATCTTCATTACAGGATGGTGGCTTTGCCCAGAGCTTTATTTGAGACGTCCTTTTAATAGCTATTCTTCTTTTAGGCTGGACAAATTACTAGAAGCAAAAGCTAAACAAGGGGTTCAGATCTACGTGCTTCTTTACAAGGAGGTTTCTATAGCTTTAAAAATCAACAGTTTGTATAGTAAGAGAAGACTCCTCAACATTCATGAAAATGTGAGGGTATTGCGCTATCCAGATCGTTTTCCAACTGGCGTCTATTTATGGTCCCATCATGAAAAACTAGTGATTGTTGATTACAAGGTTTGTTATATTGGAGGATTAGATTTATGTTTTGGTCGATACGACACAACTGAACATAAAGTGGGTGATTCCCCCCCTGTGATGTGGCCAGGAAAGGACTATTACAACCCAAGAGAATCTGAACCAAATTCTTGGGAAGACACAGTAAGAGATGAATTGGATCGCCAAAAGTATCCTCGAATGCCATGGCATGATGTCCAATGTGCTCTTTGGGGACCTCCCTGTCGTGACATTGCTCGGCACTTTGTTCAACGTTGGAACCATGCTAAGAGAACCAAAGCTCCAAACGAACAAAAAATTCCACTACTCATGCCTCACCACCACATGGTCATCCCTCATTACTTGGGAAGAAGCAAAGAGATAGACATTAACAGAAAGAAAGAAGAGGAAGAACAAGAACAAGAGAACAGCAAAGAAATCTCAAGGCAGGACTCCTTTTCCTCAGAATCACCATTGGAAGATATACCACTACTTTTACCTCAAGAAGCTGGTGAATTATTCACTTCTGATGGAGGCCTCAAGTTAAATGGAAGCAGTACTACATATAATAAACTAGCTGATCATACGAATTCTTGTGAAAAATTGCATCAAACTTCGGATACCCAGGCGTATGTGTTTCAAGATGAATATGGGCAATCCACTGCTGACACTTACGACAATGGACCGGAAGCTACAGAAAGAGGTAATTTTGATTCTGCTGCGGCTTTGGAATATGGACAAGTTGGTCCTAGTACTGCTTGTCGCTGTCAGATAATCAGAAGTGTGAGCCAGTGGTCTGCTGGAACAAGTCAGCATGAAGAAAGCATTCACACTGCATATTGTTCTCTTATTGAGAAAGCAAAGCATTTTATCTACATTGAGAATCAATTCTTCATATCAGGTCTAGCGGGGGATGAGACTATACAGAACCGAGTATTGGAAGCACTATATAGGCGTATTTTGCAAGCCCGGAAAGAAGATAAGACTTTTAGAGTTATAATTGTGATCCCTCTCTTGCCTGGCTTTCAGGGTGGTCTGGATGATGGTGGTGCAGCAACCGTGAGAGCCATAACGCATTGGCAATATCGAACAATTTCTAGAGAGAAACACTCCATATTACATAATCTTGAAGCCTTGCTGGGTCCTAAAACACGTGACTACATTTCTTTCTACGGTCTGCGATCTCATGGTAGACTTTACCCCGGTGGTCCAGTGGCTACAAGTCAGGTTTATGTTCACAGTAAACTGATGATAATAGATGACCGCACTGCTTTAATTGGGTCATCCAATATAAACGACAGGAGTTTACTGGGATCAAGAGACTCTGAGATTGGAGTGGTTATTGAAGACAAAGAGTATGTTGAATCATCTATGAATGGAAAGCCCTGGAAAGCTGGGAAATTTTCTTATACCCTTCGTTGCTCCCTATGGTCTGAGCACCTTGGCCTGAACACTGGAGAGATTGGTAAAATCAGTGATCCTGTGGCAGATACAACCTACAAGGATTTATGGAGAGCAACTGCAAAGGAAAATACTAGGATATACCATGAGGTGTTTGCTTGCATTCCCAACAATGAGATACGCTCAAGAGCTGCTCTTAGACAAAGCTGGAATCAGTGGAAGGAGAAATTTGTTCATACCACCATAGACCTCGGAATTGCTCCTGAGAAGTTAGTATGTCGAGAGAATGGATTAATCAAAGTAACAGATCCCATGGATAGATTGAAGTCTGTAAAGGGTCATCTTGTTTCATTCCCTTTGGAGTTCATGCGTGAAGAAGATTTAAGACCGGTTGTAATTGAGAGTGAGTTCTTCGTAGCTCCTCAAGTATATCACTGA 3240 0.4188 MSCERLIEGPGIMPETLSPLACHPFFIFEELPIATIVSVSRPETGDISPILLSYTIDLQYKQASSLFFSLSTSQVLYLHFALKKRALIEEFHDKQEQVKEWLQSLGIVDQTAMVQDDEEPDDGTVPLNHEDSVRSRYVPSIAALPIIRPSLGGQQSVADKAKVAMQGYLNHFLGSIDIVNSREVCRFLEVSKLSFSHEYGPKLKEGYVMVNHLSSRDSDVTCLPCDWFSCFTSNWHKVWAVLKPGFLALLDDPLDNKPLDVIVFDVLPSSNGNKGYQVSLANHIKEGHPLQYTFQVTGGNRSIKLRTTSCAKAKDWVLAINGAGLRPSEGWCHPHRFGSFAPVRGLAEDGSQAQWFVDGEAAFAAIASSIQEAKSEIFITGWWLCPELYLRRPFNSYSSFRLDKLLEAKAKQGVQIYVLLYKEVSIALKINSLYSKRRLLNIHENVRVLRYPDRFPTGVYLWSHHEKLVIVDYKVCYIGGLDLCFGRYDTTEHKVGDSPPVMWPGKDYYNPRESEPNSWEDTVRDELDRQKYPRMPWHDVQCALWGPPCRDIARHFVQRWNHAKRTKAPNEQKIPLLMPHHHMVIPHYLGRSKEIDINRKKEEEEQEQENSKEISRQDSFSSESPLEDIPLLLPQEAGELFTSDGGLKLNGSSTTYNKLADHTNSCEKLHQTSDTQAYVFQDEYGQSTADTYDNGPEATERGNFDSAAALEYGQVGPSTACRCQIIRSVSQWSAGTSQHEESIHTAYCSLIEKAKHFIYIENQFFISGLAGDETIQNRVLEALYRRILQARKEDKTFRVIIVIPLLPGFQGGLDDGGAATVRAITHWQYRTISREKHSILHNLEALLGPKTRDYISFYGLRSHGRLYPGGPVATSQVYVHSKLMIIDDRTALIGSSNINDRSLLGSRDSEIGVVIEDKEYVESSMNGKPWKAGKFSYTLRCSLWSEHLGLNTGEIGKISDPVADTTYKDLWRATAKENTRIYHEVFACIPNNEIRSRAALRQSWNQWKEKFVHTTIDLGIAPEKLVCRENGLIKVTDPMDRLKSVKGHLVSFPLEFMREEDLRPVVIESEFFVAPQVYH 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00213 1079 CDD PH_PLD 179 321 - -
Bach8g00213 1079 MobiDBLite consensus disorder prediction 600 616 - -
Bach8g00213 1079 SMART PH_update 202 327 IPR001849 -
Bach8g00213 1079 Gene3D Endonuclease Chain A 685 938 - -
Bach8g00213 1079 Gene3D Endonuclease Chain A 347 613 - -
Bach8g00213 1079 ProSiteProfiles PH domain profile. 201 325 IPR001849 -
Bach8g00213 1079 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 875 902 IPR001736 GO:0003824
Bach8g00213 1079 CDD PLDc_vPLD1_2_yPLD_like_2 735 919 - -
Bach8g00213 1079 Gene3D - 203 322 IPR011993 -
Bach8g00213 1079 Pfam Phospholipase D Active site motif 460 487 IPR001736 GO:0003824
Bach8g00213 1079 SUPERFAMILY PH domain-like 211 322 - -
Bach8g00213 1079 PIRSF PLD_euk 500 1079 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bach8g00213 1079 PIRSF PLD_euk 47 506 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bach8g00213 1079 FunFam Phospholipase 709 929 - -
Bach8g00213 1079 MobiDBLite consensus disorder prediction 600 625 - -
Bach8g00213 1079 CDD PLDc_vPLD1_2_yPLD_like_1 353 497 - -
Bach8g00213 1079 Coils Coil 597 618 - -
Bach8g00213 1079 SUPERFAMILY Phospholipase D/nuclease 323 580 - -
Bach8g00213 1079 PANTHER PHOSPHOLIPASE D 130 1063 IPR015679 -
Bach8g00213 1079 SMART pld_4 875 902 IPR001736 GO:0003824
Bach8g00213 1079 SMART pld_4 460 487 IPR001736 GO:0003824
Bach8g00213 1079 Pfam PLD-like domain 748 921 IPR025202 -
Bach8g00213 1079 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 460 487 IPR001736 GO:0003824
Bach8g00213 1079 SUPERFAMILY Phospholipase D/nuclease 714 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00213 Bach-Chr8 1392266 1397918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00213 27 1079 Phospholipase D Gene Family (Wang group) AT3G05630 64.878 0.0 1378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00213 K01115 - gmx:100796914 1672.14