Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00209 ATGGCCTTGGTTAATTTCTTTTTGTTTCTCATCCTTTTACCTTCATACGAGGCTCTTCCAAATGAATTTCCCTCGGACATGAAAACCCCAGACATGCATGCCTTGATTGCACAAGCCTGCATGGATGTTGAAAATCCAAACTCATGCTTCACCAATATTCAAAATGAGCTTCACAAAATTGACCCTCCAAGTCCCACTTCAGTTCTACGTGCCGCGCTCAGGGCCGCGCTAGGTGAAGCTAGAAATGCCATTGATAAAATGACAAAGTTCAGTACTTTCTCAGTAAGCTATCGTGAACAACTAGCGATAGAAGATTGCAAGGAACTGTTAGATTTCTCTGTGAATGAGTTGGCATGGTCCTTGGCAGAGATGAAGAGAATTCGAGGAGGTGATAAGAATGTGCAGTATGAAGGAAATCTCGAAGCTTGGCTAAGTGCAGCACTGAGTAACCAAGACACATGCCTTGAAGGGTTTGAGGGCACAGACAGGCGTCTTGAGAGTTACATCAGTGGAAGCTTGACACAAGTGACACAACTTATCAGCAATGTCTTGGCTCGGTATACTCAATCACATGCCTTACCCTTCAAACCTACCAGAAATACTAGTCTCACCACGAATGAAGAAAGCTTGGAGTTTCCAGAGTGGGTGACTGAAGGTGATCAAGAGCTTCTTAAATCCGGGACACAAGGTGCAATGCACGCAAATGCTGTTGTGGCATTGGATGGGAGCGGTCACTATCGCACAATCAATGAAGCTGTGAATGCAGCTCCAAGCCAAAGTAACAGGAAGTATGTTATATATATAAAGAAGGGACTATACAAGGAGAATATAGACCTGAAAGGGAAGAAAACCAACATCATGTTGATAGGGGATGGCATTGGCAAAACAATTGTCACCGGCAACCGGAATTTCATGCAAGGATGGACAACTTTTCGAACTGCCACACTTGCTGTGTCTGGGAAGGGATTCATAGCGAGAGACATGTCAATCCGTAACACGGCTGGGCCAGAAAACCATCAAGCAGTGGCACTGCGTGTGGATTCAGACCAATCTGCCTTCTACCGGTGCAGTGTGGAAGGCTACCAAGACACCCTTTATGCTCATTCACTGAGACAATTCTATAGGGAATGTGAAATCTATGGCACAATAGACTTCATTTTTGGCAATGGTGCTGCTGTGCTGCAAAATTGCAAGATATACACCAGAGTGCCACTTCCATTGCAGAAGGTGACAATTACGGCACAGGGAAGGAAAAGCCCACATCAGAGCACTGGTTTTGTAATCCAGGATAGCTATGTGCTTGCAACCCAACCTACCTATTTGGGAAGGCCTTGGAAGCAATACTCTAGGACAGTTTATATTACCACTTACATGAGTGGCCTAGTCCAGCCCAGAGGCTGGCTTGAGTGGTTCGGTAACTTTGGCTTGAACACTTTGTGGTACGGTGAGTATAGAAACAAGGGCCCGGGTGCATCACTCGCCGGAAGGGTGAACTGGCCAGGCTACCACATTATTCGAGATGCAGCCACCGCTGGTTTCTTCACCGTTGAACGCTTCATTGACGGTGGATCATGGTTGCCGGGAACAGGTGTCAGGTTTACATCTGGCTTGAGCAATTAA 1620 0.4617 MALVNFFLFLILLPSYEALPNEFPSDMKTPDMHALIAQACMDVENPNSCFTNIQNELHKIDPPSPTSVLRAALRAALGEARNAIDKMTKFSTFSVSYREQLAIEDCKELLDFSVNELAWSLAEMKRIRGGDKNVQYEGNLEAWLSAALSNQDTCLEGFEGTDRRLESYISGSLTQVTQLISNVLARYTQSHALPFKPTRNTSLTTNEESLEFPEWVTEGDQELLKSGTQGAMHANAVVALDGSGHYRTINEAVNAAPSQSNRKYVIYIKKGLYKENIDLKGKKTNIMLIGDGIGKTIVTGNRNFMQGWTTFRTATLAVSGKGFIARDMSIRNTAGPENHQAVALRVDSDQSAFYRCSVEGYQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFVIQDSYVLATQPTYLGRPWKQYSRTVYITTYMSGLVQPRGWLEWFGNFGLNTLWYGEYRNKGPGASLAGRVNWPGYHIIRDAATAGFFTVERFIDGGSWLPGTGVRFTSGLSN 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00209 539 Gene3D - 229 537 IPR012334 -
Bach8g00209 539 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 185 IPR035513 -
Bach8g00209 539 PANTHER PECTINESTERASE 16 527 - -
Bach8g00209 539 FunFam Pectinesterase 33 192 - -
Bach8g00209 539 FunFam Pectinesterase 229 537 - -
Bach8g00209 539 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 189 IPR035513 -
Bach8g00209 539 SUPERFAMILY Pectin lyase-like 231 536 IPR011050 -
Bach8g00209 539 ProSitePatterns Pectinesterase signature 2. 379 388 IPR033131 -
Bach8g00209 539 Pfam Pectinesterase 235 522 IPR000070 GO:0030599|GO:0042545
Bach8g00209 539 CDD PMEI-like_4 48 190 - -
Bach8g00209 539 Pfam Plant invertase/pectin methylesterase inhibitor 35 185 IPR006501 GO:0004857
Bach8g00209 539 SMART PMEI_2 31 186 IPR006501 GO:0004857
Bach8g00209 539 NCBIfam pectinesterase inhibitor domain 3 189 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00209 Bach-Chr8 1374641 1376344 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00209 2 539 Carbohydrate Esterase AT3G05620 63.884 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00209 K01051 - gmx:100810565 895.96