Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00208 ATGGCCATGGCCGTTAAGTTGATGGTATCTCTTGCCATTTTGATTGCCTTCTCGTCTCCTTCTCTTGAAGCTTTCTTGTTTTCCCAAGAAAATCACATATGCAAGCTCACACCCTACCCTTCCTTCTGCAGAACCACTTTGCCTCCTCATTTTTCAGGATCCATACGTGACCATGGCCAATTCTTCCTCCACCAATCTTTATCAACAACAAAAACGTTTCTTGAGTTGGTCTCTTCTCAACTCAAGGACCCTTCAACAATTCGAGCTTCCACAAAACTTGCTCTTCAAGACTGTCTGCAATTGGCTCAACTTAACATTGATTTCTTTTACATTACCCTCCAAACCATTGCAAACACCCTGACTCCTTTTCAAGCTTGTGATTCGCAAACATTGCTTAGTGCAACGTTAACCAATCAGCAGACATGCTTGGATGGCTTTAATGAGGTAACCCCATATCCTAGCATTATCAATGGCTTACTCAGCCCTCTCTCTGATGGCATTAAGCTTTATAGCATATCTCTCGCCATTTTCAACCGTGGTTGGACTTCAGTGACAGAAACAAAGCCTGCTGAGACGACCATTAACATGAACAGGAAGTTACTCCAGAAAAGCATTGACAATGATGTGGTGATGGTGAGAGAAAAAGTGGTGGTGAACCCAGATGGATCTGGGGATTTCACCACCATTAATGATGCAGTGGCGGCTGCACCTAATAATACGGGCACCAACAACGGCTACCATGTAATTCATGTTGTAGCTGGAGTTTACAATGAATATGTATCTATACCTAAGAGCAAAGAAAACTTGATGATCGTGGGCGATGGCATTAATAGAACTGTCATCACCGGCAATCGAAGTGCGGTTGATGGCTGGACCACATTTCAATCTGCAACTTTTGCAACCTCCTCTTCATCCATTTGCAATCTTACACCTCATCCCACGTTATGCCAATCCAATTCACCTTCTAACACCTCAGGGAACGACATCCATGAGTATTGCCGTTTTTTCGTAGAGAAATCCTTGTCATTATCACTCCAGCTCCTTAGATATGTCTCCTCTCGGTCTAATGTCCCTTCGTCCACCTTGCTTGCCCTTGAAGATTGCAAGCTTTTAACTGAACTCAATGTAGATTTCTTGTCAAGCACTCTGAGAAGCATCAATGCCGCAAACATTAGCAGTAGCTCATCACAGGCTGAGGATTTGCACACCTTGCTTAGTGCTACTATAACCAACCTTGTAACCTGCTCAGATGGCCTTCAACAAGCGACGTCGTCTAGCTCTGACGAATACCTGCAGAGCCTTCTTCTCAATGGCACCATGTCACAAAGCATATCTCTTGCACTCTTCAAACATGGATGGGCTAGCACCACAACGGGCAGAAAGCTAACTGAAGGATACCACGCTTGGGAGCAAAGCCTGTACGAGACTATCAGAACAAGTGGTAGAAAGCTGCTTCAGTATCCTCCTGACAATGTCTTGGTGAGCCAAAGGGTGGTGGTGAACCTAGATGGCTCTGGAAATTACACCACCATCAATGATGCGGTGAATGCTGCACCAAACAACACCGATGGTAGCACAGGTTTCTTTGTGATTTACGTTGTGGCGGGGATCTATCAAGAGTATCTATCCATTCCCAAAACCAAGAAATACCTCATGATGATAGGAGATGGAATAAACCAGACAGTGATCACTGGAAATCAAAGCGTGGGTGGTGGCTCGACTACCTTCAATTCTGCCACATTCGGTAATTAA 1752 0.4458 MAMAVKLMVSLAILIAFSSPSLEAFLFSQENHICKLTPYPSFCRTTLPPHFSGSIRDHGQFFLHQSLSTTKTFLELVSSQLKDPSTIRASTKLALQDCLQLAQLNIDFFYITLQTIANTLTPFQACDSQTLLSATLTNQQTCLDGFNEVTPYPSIINGLLSPLSDGIKLYSISLAIFNRGWTSVTETKPAETTINMNRKLLQKSIDNDVVMVREKVVVNPDGSGDFTTINDAVAAAPNNTGTNNGYHVIHVVAGVYNEYVSIPKSKENLMIVGDGINRTVITGNRSAVDGWTTFQSATFATSSSSICNLTPHPTLCQSNSPSNTSGNDIHEYCRFFVEKSLSLSLQLLRYVSSRSNVPSSTLLALEDCKLLTELNVDFLSSTLRSINAANISSSSSQAEDLHTLLSATITNLVTCSDGLQQATSSSSDEYLQSLLLNGTMSQSISLALFKHGWASTTTGRKLTEGYHAWEQSLYETIRTSGRKLLQYPPDNVLVSQRVVVNLDGSGNYTTINDAVNAAPNNTDGSTGFFVIYVVAGIYQEYLSIPKTKKYLMMIGDGINQTVITGNQSVGGGSTTFNSATFGN 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00208 583 Pfam Plant invertase/pectin methylesterase inhibitor 304 428 IPR006501 GO:0004857
Bach8g00208 583 Pfam Plant invertase/pectin methylesterase inhibitor 32 176 IPR006501 GO:0004857
Bach8g00208 583 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 179 IPR035513 -
Bach8g00208 583 SUPERFAMILY Pectin lyase-like 214 306 IPR011050 -
Bach8g00208 583 CDD PMEI-like_3 306 454 - -
Bach8g00208 583 Gene3D Invertase/pectin methylesterase inhibitor family protein 305 451 IPR035513 -
Bach8g00208 583 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 179 IPR035513 -
Bach8g00208 583 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 305 451 IPR035513 -
Bach8g00208 583 CDD PMEI-like_3 33 182 - -
Bach8g00208 583 NCBIfam pectinesterase inhibitor domain 3 176 IPR006501 GO:0004857
Bach8g00208 583 SUPERFAMILY Pectin lyase-like 495 581 IPR011050 -
Bach8g00208 583 Pfam Pectinesterase 216 305 IPR000070 GO:0030599|GO:0042545
Bach8g00208 583 Pfam Pectinesterase 498 582 IPR000070 GO:0030599|GO:0042545
Bach8g00208 583 SMART PMEI_2 21 176 IPR006501 GO:0004857
Bach8g00208 583 SMART PMEI_2 298 448 IPR006501 GO:0004857
Bach8g00208 583 Gene3D - 492 583 IPR012334 -
Bach8g00208 583 Gene3D - 180 304 IPR012334 -
Bach8g00208 583 PANTHER PECTINESTERASE 14 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00208 Bach-Chr8 1368902 1373492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00208 302 582 Carbohydrate Esterase AT4G02330 41.250 8.90e-60 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00208 K01051 - qsa:O6P43_007461 349.747