Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00207 ATGTCATCGGAGGATGGAGACAGGAAGAAGAGAGTTGCCCTTATTGGCGTTTCTGCCTTCCTACTGGTGGCTATGGTTGTCGCTGTTACAGTTGGTGTGGCATTAGAAAAAGGTGAATCTTCTGAGGAGCCTGAGGACAACAACAAGTCTCATGACGTGTCTAACACAATGAAGGCCGTGAGATCAATTTGCCAACCTACTGATTACAAACAGGAATGCATTGACAGTATTAAAGGGGAGGCTGGCAATGTGACAAACCCTAGAGAATTGGTTAAGATTGCATTTAACGTCACTATTAAAAATATTGTTGAAGGGGTGAAGAAATCACAGCTGTTGCAAGATGTGGAGAAGGAGCCCAGAGCCAAGATGGCACTTGATTCATGCAAGTACCTCATGGACCAATCCATTGCCGATCTTGAACGCTCAGTTGAGAAAGTGGGTGAGTTTGATATCATGAACATCCACGATATATTCATGGATTTGAAGGTTTGGCTCAGCGGTGCCATCACATACCAAGAGACATGCTTAGATGGGTTCCAGAACACAACAAGCGAAGCTGGGCAGAAGATGAAGGAAGCATTGATATTGGCCATGCGCTTGAGTAGCAATGGGCTTGCCATCATCGACAGTTTCTCAGAAACTCTCACCAAGTTGAACATCACAACACGTAGTGGGGGACGCAGACTACTTGAAGACGGCCATGTTCAAAATACTAATTATGCTGATTTGGATACAGATGAGAACGTTCTGGGTCACGGCGAACTTCCCCTGTGGATTAGCGGTAGTCTTCGTCGTAGACTCCTATCTGAGAAAGTCCCAGGCTTAGGCAAACGCAAGCCCGATGGTGTTGTTGCCAAAGATGGGAGTGGAGATTTCAATAGCATCAGTGAGGCATTGAAGAAGGTACCCAAGAACAACAAAACGCCCTTCATAATCTACATTAAGGAAGGCATTTACAATGAGTATATCACCGTTGAGAGGAGTATGACCAATGTCATCCTCATCGGTGATGGTGGAGAAAAGACACGCATCACCGGCGACAAGAACTTCATCGACGGGGTTAACACCTTCAAAACTGCCACTTTTGGTACGTTCTATAAAGGAGACGCTTGGATTAAGAGAACCGGAGTACCATACTCCCCTGGCACCTTTTCCTCCAAGTCTGATTCTGACAAAGATTCTGACTCCAAGTCGAAGTCCGATGATTCCGACTCTAAGTCCGACTCCGACTCCAAATCTAAATCTGGTAATTCAGAATCTAAGTCGGACTCCGACTCTGGTTCTGACTCCAAATCTAAGTCTGATCACTGA 1311 0.4561 MSSEDGDRKKRVALIGVSAFLLVAMVVAVTVGVALEKGESSEEPEDNNKSHDVSNTMKAVRSICQPTDYKQECIDSIKGEAGNVTNPRELVKIAFNVTIKNIVEGVKKSQLLQDVEKEPRAKMALDSCKYLMDQSIADLERSVEKVGEFDIMNIHDIFMDLKVWLSGAITYQETCLDGFQNTTSEAGQKMKEALILAMRLSSNGLAIIDSFSETLTKLNITTRSGGRRLLEDGHVQNTNYADLDTDENVLGHGELPLWISGSLRRRLLSEKVPGLGKRKPDGVVAKDGSGDFNSISEALKKVPKNNKTPFIIYIKEGIYNEYITVERSMTNVILIGDGGEKTRITGDKNFIDGVNTFKTATFGTFYKGDAWIKRTGVPYSPGTFSSKSDSDKDSDSKSKSDDSDSKSDSDSKSKSGNSESKSDSDSGSDSKSKSDH 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00207 436 Gene3D - 276 377 IPR012334 -
Bach8g00207 436 SMART PMEI_2 55 207 IPR006501 GO:0004857
Bach8g00207 436 SUPERFAMILY Pectin lyase-like 280 364 IPR011050 -
Bach8g00207 436 Pfam Pectinesterase 283 365 IPR000070 GO:0030599|GO:0042545
Bach8g00207 436 NCBIfam pectinesterase inhibitor domain 53 209 IPR006501 GO:0004857
Bach8g00207 436 MobiDBLite consensus disorder prediction 388 436 - -
Bach8g00207 436 Pfam Plant invertase/pectin methylesterase inhibitor 59 207 IPR006501 GO:0004857
Bach8g00207 436 CDD PMEI-like_3 62 212 - -
Bach8g00207 436 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 211 IPR035513 -
Bach8g00207 436 PANTHER PECTINESTERASE 19 364 - -
Bach8g00207 436 MobiDBLite consensus disorder prediction 382 436 - -
Bach8g00207 436 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 211 IPR035513 -
Bach8g00207 436 ProSitePatterns Pectinesterase signature 1. 306 325 IPR018040 -
Bach8g00207 436 FunFam Pectinesterase 56 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00207 Bach-Chr8 1365276 1367292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00207 4 361 Carbohydrate Esterase AT3G05610 41.061 3.46e-92 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00207 K01051 - qsa:O6P43_007462 376.711