Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00181 ATGGACAATGAACAAGATAGCCTGTTGCCAATTGCAAATGTGGGCCGGATCATGAAGCAAATCCTTCCTCCTGGTGCAAAGATCTCCAAAGAAAGCAAGCAAGTAATGCAAGAATGTGCAACAGAATTCATAAGTTTTGTGACTAGTGAGGCTTCTGACAAGTGTCACAAGGAGAATCGAAAGACCGTCAATGGGGATGACATCTGTTGGGCTCTGAGTGCCTTAGGGTTTGATAACTATGCTGAGGCCATAGGAAGTTACTTGCATAAATACAGGCAAGCTGAGAGGGAGAAAGCAAATCTAAGCAAAGGGGATAAATTCCAAGAAACGTATGAAGCATCATCAACCAAAAGAAGCAGCCAACAAGAGAAGCAAACTGAAATTCATGCTCCAAGGGAGAACGCTCAGATCTCTTCTGCAAATCAATCTTGA 432 0.4306 MDNEQDSLLPIANVGRIMKQILPPGAKISKESKQVMQECATEFISFVTSEASDKCHKENRKTVNGDDICWALSALGFDNYAEAIGSYLHKYRQAEREKANLSKGDKFQETYEASSTKRSSQQEKQTEIHAPRENAQISSANQS 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00181 143 MobiDBLite consensus disorder prediction 95 143 - -
Bach8g00181 143 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 9 72 IPR003958 -
Bach8g00181 143 SUPERFAMILY Histone-fold 5 124 IPR009072 GO:0046982
Bach8g00181 143 Gene3D Histone, subunit A 1 142 IPR009072 GO:0046982
Bach8g00181 143 MobiDBLite consensus disorder prediction 107 121 - -
Bach8g00181 143 ProSitePatterns NF-YB/HAP3 subunit signature. 39 55 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bach8g00181 143 PRINTS CCAAT-binding transcription factor subunit A signature 36 54 - -
Bach8g00181 143 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Bach8g00181 143 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Bach8g00181 143 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 2 127 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00181 Bach-Chr8 1207996 1208427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00181 4 140 CCAAT-HAP3 Transcription Factor Family AT1G09030 62.044 7.99e-57 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bach8g00181 CBFD_NFYB_HMF 3.6e-25 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00181 K08065 - qsa:O6P43_007507 197.208