Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00176 ATGGCAGATTCACAGTGGAGTTCGAAAACTTTCAGTGTTCGGATTGTCTCCATCGACTACTACATGGCCCCGCCGATCCCAGGCATCGATGTCTGTTACAGTAGCTTCCATGGTGGAAAGGTGAACGAGGTTCCTGTACTAAGAATATATGGTTCTACTCCGGCTGGGCAGAAGACGTGCTTGCACATACATCGAGCTTTTCCCTATCTGTATGTGCCGTGTGCAGATATACCCGGTCAACCAGACCAATCAGGTGATGGATACGCCTATAAGGTATCTGCTTCGCTTGAGAAAGCCTTGAAGCTTAAAGGTAGTGCGGGTTCAACAAGACAACATGTACATGGTTGCAGCCTTGTCCGAGCAAGGAAATTTTATGGATATCATTCTTCAGAAGAGTTATTTGTGAAGACATACCTGTATCATCCACATGATGTCTCCCGTGCAGCGAATCTACTCTTGGGTGGTGTTGTTCTTGGTAAAAGTTTGCAGCCCCATGAATCACATATACCTTTTATTCTTCAGTTTCTGGTTGACTATAACTTGTATGGCATGGGCCATGTGCACCTATCAAAGATGAAGTTCCGTCATCCCATAACATTAGTTGATGAGAAATTCAATTGCAAAACCCAGCAGAGAGTGGCAGATCCAGGTGGTGATGTATGTGTGGAGTCACCGATGTGGATATCTTCTTATGTTCCATCTGACTGGATGTGGCAACCTGCAAGTGAATTGGGTGCTTCTTCAAATTATGAGGCTCACTGCCCTAAACGTCAAAGCACATGTGAACTTGAGGGAGATGCGTCTGTGGATGAGATTCTTAATCAGCAATTTAAAATGTACACATCTCTCTCCCAAACACGCTCAGATGTAAAAATGGTTCAGTCGCTCATACCAATCTGGGAGGAGCAACAGGAAAAAATTGGAATTTGTGAGAGTAATTTGTCTCCTGATCCTGGAAAACCACTTCCAGATGAAGTTCTGAAATCTCTCTCTATGGGTCTGGATTTTGAGAAAATATTTTTTGAACTCTGCAGTGAAGCAAAAACGTCTTCATTTTCCACTTCTTCTGAGAAGGAGTTAAGAGAAACAGATATAATAGGCTCAGCATCACCGCCAGATTCATTATGTGAATGGGGCAAATTGCCTGGGGGAGCAATTGATTCAAGTATCAAATTAACTGTTGATGAAATGCAGTCATCTGAAATGGTTGGAACATTGGACACCAAGGCTACTGATAGAGAAGCATTGAATCTCTTAAAATGGCTTGCAAGTTCTCAGGCTGCAGAGGCTATGAACTCTGATGATGAGCTTGTTTGTGAAACCATTTTGAGCCCATTATTACCTGCTGCAACAATTGATCAGGTGTTGGAGAAAGCTAATATGGATTACAAGAGTGAGTCCCAGAAAGAGTGTCAAGATATTCTAGATTCAATTGATGATGTAAATGAGTTAGAGTTACCCGAGGAAAAGCCTTCTTCCTCTAATCTCAGCCATTGCATTCGGGCTTCATTAAATAATGTGATTCCCCAAGTTGATGGTTCTGGTGATGATGGATTATCAAGTCCATGTGCTAGTTCAGGTGAAACATCATCTGCAATAGGGATAAATAGTGGATCCAAATTGTCTTCTGAATACTCATCACTGCAGAATATTGACACAAATATAGTTAGTAAAGATAAAGGGAATAAACTATGGGGTTCTTTGCCTTTATCCATGAACCAGAGGGTTAACAATGAGCAACAAGTTATTTCATGCATGAAACATCCATTTCAAAGTGAAACTGGAGATTCTGTTGGTTCAGCTTACTTGACCAGAAATGAGACTGAGTCTGGTTTTTGTAACCTGAAAAGTGGAAGTAAAGGCACTTCTGATTCTAAAGAAGCACACACATCGGTTAACTGCTCAGTGCGGGACCTAATGAGGAGAAAGCGGTGCTACCAAGTTGAACAAGATGAATCTGATTCAGGATCAGGAATAATCAAAAAGCTTGTTTTAGACAAGGATGAAAAACAGAATGGATGCCTACGACAAAAACAACTGTGTTTTGAAACTCTGCAAATTAGAGAAGAAAAAAGAGAAGTTGAGGAAAATTGTGATCCTGAAGTGAGCAATCATGATTATTTACTGCATGGGCAACAGCCTCATCAAGCTACCAATGATGGTTGTTTAAAGACTTGTTTGCTGAAAGATGAACATTTTGGTCAACATGAAATTGATGGCGCAGAAGTGATTCCGGTGTCGAGGAGCATCACAGATGGAGATACTTGTCAAATGAACAAAGGACAGGGCCTCCATGAGACCAAAACTTTAAATTCTACTGATTCCATAGATCACTCTGAGGCTTTTAATGGTAAAATATTAAAGGTTAGCACAACTCATGCAAAACCTTTAGTTCCTGATGCCTATATGCCAAAGCAAGATTCCTTTTCTCATGTTCAGTTTTTGAGGACAGATGCTGAGCATGAAATCGGAGTCCCAAAGAGGTGTCAGAAAACCCATTTTGCAGCTTCAAGTAGTGCACAAAGCTTTACCATTGACGATGAAATGTCTGTTAAAGATAATTCCACACAGAAAAGTTCTCATGGAAGCAGATCTTATATGCAACATGGCCAGGCAAAGTCCTATGAGAATGCTGTGGGTGCAATTGCTGTAAGTGACATGCAAGTGTTACGCAGTGAGAAAACAGACAATCGAAAGCCTGGAGATATTTTGGTTTTATGTGATACTGTTGGCTCAGAATCCGATGTTCAAGGCCAAGATGGAAAACCCTTGGATGATTTTCTTCGCTTTCCTGCAAGGGATACACTTGAAGAGATGGACAATCAAAACAAATGTGTTACAATTTGTGGCTCTGGTTCTGATGGAAAAAAGGCCTTGGGTGTCACCACACACTATAAAAATGACGGATCTCAATTATACCTTTTAACACCTAAAATTTTGCCACCTTCTGTGGGGAGTGTTTGTAGATGGCTATCTTGTTATGAGAGAGATCAAATGCATCAGGAAACTGTTGAAGAGGAAAAGGCATTACCTGAATGCCCTTCCAGACCCCGCCTTAGGCCTAATCTGGACCAAGATATAAATGTTGGTGCAGAGAAGAACTCTTCATGCATCAGTGGAGGGCAGATAGGAACAAAAAAAGGCTTGGATGGCTCACAGGATATTTCTCAGATATCAGGTCCTTATAAGAAATTGAGGTCTACTCCTTTAAGTCAAATTGGATTTCGAGATCCTGCGAGTGTTGGTGGTGGACAACAATTGACATTACTAAGTATAGAGTGTTTCCATCAATTTTTTGAGGGAAAGGAGAGGAAAGAAGCCTTTTGTCCGTTTTGCCCATCAACAGTGCCCACCCTCACCAACACGTCAGCTGCTCACCCAGACCCGCAGTGCACTAACAATGATGGAGGCGAGGCTGCTGGTTGGCTCACGTGGGTGCTGGTGCGAAGTGTGCGGCGTTGCTGTCCTCCATTGACCGCCAACGAGGAAGTGCCCACTGGTTCCTCTTCCTCTCGTGCCCTCGTCCTCTCGTGTGTACCCACTGGTTCCTCTTCCTTTCGTGCCCTCGTCAAAGTTAAGGCTTTGATTGAGGTTCTTGCAGAATCAAGAGGAGATCTTTTACCTGATCCTCGTTTTGATGCAGTCAACATTTTAGCACTTGGGTTTCAGAATGATAGTAATTCTATTATTGAAGTTCTTGTGCTTTTGCATAGTAAACTTGAATCTCATCAGAGGAGTTTTGATGGTCTATCAGTCTGTAAGGTGTTGGTCTTTACTGATGAAAAGGACTTAATACAAAAATTTATAAAGATAGTATCTTCATCTGACCCTGATATTTTGATGGGATGGGATATCCAAGGTGGTTCTCTTGGATTTTTAGCAGAAAGAGCATCTCATCTTGGTTTAGGATTACTTAATAGATTATCACGCACTCCATCTGAGTCTTGGGTTGCTTCACAAGATACTAAAAATTCTGAGAAAGAGATCTTCAAACCTTCAATTCCTGATGCATCTGGTGCTGATTGTGGTGTAAAAGAAAACTCAATAATTGAGGATGAATGGGGACGCACTCACGCCAGTGGTGTTCATGTGGGAGGCAGAATCGTGCTTAATGTATGGCGATTGATCCGTGGAGAAGTAAAGCTAAGTTTATACTCAGTTGAAGCCGTTGCAGAATCTGTATTGAGGCGGAAAATCCCTTCAGTTCAATATAAGGTGCTTACAAAATGGTTTTCAAGCGGTCCTGGACGAGCAAGATATCAGTGTATCAAATATATCAGAGAGAGAGCAAAGCTGAACCTTGAGATCTTAAACCAACTTGATATGGTAAATCGAACATCAGAACTTGCTCGTGTTTTTGGTATTGACTTTTTTTCTGTTCTTTCTCGAGGTTCACAATACCGTGTTGAATCAATGTTTCTGAGGTTGGCCCACACACAAAATTATCTTGCTATCTCCCCTGGAAATCAACAGGTTGCTTCTCAACCTGCCATGGAGTGCCTACCTCTTGTAATGGAACCAGAGTCAGGATTTTATTCAGACCCTGTTGTTGTATTTGACTTTCAGTCTTTATATCCATCTATGATAATTGCATATAATCTTTGCTTTTGTACGTGCCTTGGCAAAATTTTGGCATCAAAGTCAAACACACTAGGGGTTTGTGCGTTCTCACCAGAACAGCATGTTCTGCAGGATTTAAGGAATAAAATCTTGCTCACTCCTAATGGCGTTATGTTTGTACCTTCCAAGGTTCGTAGAGGTGTACTGCCTCGCTTACTAGAAGAAATTCTATCTACTAGAATAATGGTAAAGCAAGCAATGAAAAAGTTGGCTCCTTCAGAGCAAGTTCTTTGGCGGATATTTAATGCAAGACAACTTGCTTTAAAGCTCATAGCAAATGTAACATATGGCTACACTGCTGCTGGATTTAGTGGTCGCATGCCTTGTGCGGAGCTTGCAGACAGTATTGTTCAATGTGGCCGTAGTACGCTGGAAAAGGCTATATCATTTGTAAATCGACAGGAAAAGTGGAATGCTAAAGTTATTTACGGAGATACTGATAGCATGTTTGTCCTCCTTAAAGGACGGACTCTTAAAGAATCATTCCAGATTGGGAGTGAGATTGCTTCTGCTGTCACTGCTATGAATCCCAGTCCTGTCACCCTGAAGATGGAGAAAGTTTATCACCCTTGTTTCCTCCTTACCAAGAAACGATATGTTGGTTATAGTTATGAAAGCCCTGATCAAACCGAACCAGTTTTTGATGCTAAAGGCATTGAGACAGTTCGTAGGGACACATGTGGTGCCGTTGCAAAGATAATGGAACAGTCTTTGAGACTCTTTTTTGAGCGTCAGGATTTATCAGAGGTGAAATCTTATTTACAACGTCAGTGGAAGAGGATTCTTTCAGCTAGAATCTCTCTTAAAGATTTTGTTTTCGCCAAGGAAGTTCGCTTGGGAACCTACAGTGCAAGAACATCATCACTACCTCCTGCTGCAATTGTGGCCCTTGAGGCAATGAGAGTTGATCCTAGGGCAGAACCACGTTATGCTGAGCGAATACCTTATGTTGTAATCCATGGAGAGCCTGGATCCCGCCTGGTTGATATGGTTGTGGGTCCATTGGAAGTTTTGGCTATTGATTCCCCGTACAGAATAAATGATTTGTATTACATCAATAAACAAATAATACCAGCTTTGCAGCGGGTATTTGGGCTTGTTGGTGCTGACCTGAACTGGTGGTTCTCAGAGATGCCCCGTTCTGTAAGGGAAGCGTCTGCAAAGCATCCCTTCGCTTCTAATTTACATCGAACCAGAATTGATTATTACTATCTCTCAAAACATTGTATACTGTGTGGTGGGCTAGTGCAGGCATCAGACTACATATGTAATAGGTGTTCTGAAAATGGTGTGGCTGCTGCAACGGCTTTGATTAGTAAAACTTCAAAGTTGGAGCAAGAGATGCAACATCTTGTTGGTATATGTCACCATTGTGGAGGTGGGGACAAGCTTCTGGAAAGTGGTGTGAAGTGCACGTCGATTTCATGCTCAGTGTTCTATGAAAGGCGGAAAGTACAGAAAGAACTACTAACCACGAACCATGTTGCCGCAAATAAAGGCTTGTACCCAAGATGCGCGGTGGAGTGGTTCTAAAAGTTGTGGTTGTTTCAGCATACTGGCGGGGTGCTTTTTTGGTTAGGTTTGATCGTGTTAGGATTTGTTCTTCTTTTTCTTTCCTCCATCTTTTTTGGGGAGGGGGGTTGCTCTATAGGGTCATTTCAGAGTCAGTTATTGTTTTACGAT 6303 0.4193 MADSQWSSKTFSVRIVSIDYYMAPPIPGIDVCYSSFHGGKVNEVPVLRIYGSTPAGQKTCLHIHRAFPYLYVPCADIPGQPDQSGDGYAYKVSASLEKALKLKGSAGSTRQHVHGCSLVRARKFYGYHSSEELFVKTYLYHPHDVSRAANLLLGGVVLGKSLQPHESHIPFILQFLVDYNLYGMGHVHLSKMKFRHPITLVDEKFNCKTQQRVADPGGDVCVESPMWISSYVPSDWMWQPASELGASSNYEAHCPKRQSTCELEGDASVDEILNQQFKMYTSLSQTRSDVKMVQSLIPIWEEQQEKIGICESNLSPDPGKPLPDEVLKSLSMGLDFEKIFFELCSEAKTSSFSTSSEKELRETDIIGSASPPDSLCEWGKLPGGAIDSSIKLTVDEMQSSEMVGTLDTKATDREALNLLKWLASSQAAEAMNSDDELVCETILSPLLPAATIDQVLEKANMDYKSESQKECQDILDSIDDVNELELPEEKPSSSNLSHCIRASLNNVIPQVDGSGDDGLSSPCASSGETSSAIGINSGSKLSSEYSSLQNIDTNIVSKDKGNKLWGSLPLSMNQRVNNEQQVISCMKHPFQSETGDSVGSAYLTRNETESGFCNLKSGSKGTSDSKEAHTSVNCSVRDLMRRKRCYQVEQDESDSGSGIIKKLVLDKDEKQNGCLRQKQLCFETLQIREEKREVEENCDPEVSNHDYLLHGQQPHQATNDGCLKTCLLKDEHFGQHEIDGAEVIPVSRSITDGDTCQMNKGQGLHETKTLNSTDSIDHSEAFNGKILKVSTTHAKPLVPDAYMPKQDSFSHVQFLRTDAEHEIGVPKRCQKTHFAASSSAQSFTIDDEMSVKDNSTQKSSHGSRSYMQHGQAKSYENAVGAIAVSDMQVLRSEKTDNRKPGDILVLCDTVGSESDVQGQDGKPLDDFLRFPARDTLEEMDNQNKCVTICGSGSDGKKALGVTTHYKNDGSQLYLLTPKILPPSVGSVCRWLSCYERDQMHQETVEEEKALPECPSRPRLRPNLDQDINVGAEKNSSCISGGQIGTKKGLDGSQDISQISGPYKKLRSTPLSQIGFRDPASVGGGQQLTLLSIECFHQFFEGKERKEAFCPFCPSTVPTLTNTSAAHPDPQCTNNDGGEAAGWLTWVLVRSVRRCCPPLTANEEVPTGSSSSRALVLSCVPTGSSSFRALVKVKALIEVLAESRGDLLPDPRFDAVNILALGFQNDSNSIIEVLVLLHSKLESHQRSFDGLSVCKVLVFTDEKDLIQKFIKIVSSSDPDILMGWDIQGGSLGFLAERASHLGLGLLNRLSRTPSESWVASQDTKNSEKEIFKPSIPDASGADCGVKENSIIEDEWGRTHASGVHVGGRIVLNVWRLIRGEVKLSLYSVEAVAESVLRRKIPSVQYKVLTKWFSSGPGRARYQCIKYIRERAKLNLEILNQLDMVNRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGNQQVASQPAMECLPLVMEPESGFYSDPVVVFDFQSLYPSMIIAYNLCFCTCLGKILASKSNTLGVCAFSPEQHVLQDLRNKILLTPNGVMFVPSKVRRGVLPRLLEEILSTRIMVKQAMKKLAPSEQVLWRIFNARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNRQEKWNAKVIYGDTDSMFVLLKGRTLKESFQIGSEIASAVTAMNPSPVTLKMEKVYHPCFLLTKKRYVGYSYESPDQTEPVFDAKGIETVRRDTCGAVAKIMEQSLRLFFERQDLSEVKSYLQRQWKRILSARISLKDFVFAKEVRLGTYSARTSSLPPAAIVALEAMRVDPRAEPRYAERIPYVVIHGEPGSRLVDMVVGPLEVLAIDSPYRINDLYYINKQIIPALQRVFGLVGADLNWWFSEMPRSVREASAKHPFASNLHRTRIDYYYLSKHCILCGGLVQASDYICNRCSENGVAAATALISKTSKLEQEMQHLVGICHHCGGGDKLLESGVKCTSISCSVFYERRKVQKELLTTNHVAANKGLYPRCAVEWF 2050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00176 2050 Gene3D Helix hairpin bin 1582 1642 - -
Bach8g00176 2050 Pfam DNA polymerase family B, exonuclease domain 1250 1327 IPR006133 -
Bach8g00176 2050 Gene3D DNA Polymerase, chain B, domain 1 29 197 - -
Bach8g00176 2050 Pfam DNA polymerase family B 1457 1904 IPR006134 GO:0000166|GO:0003677
Bach8g00176 2050 SUPERFAMILY DNA/RNA polymerases 1503 1917 IPR043502 -
Bach8g00176 2050 SMART polmehr3 1187 1695 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bach8g00176 2050 FunFam DNA polymerase zeta 1583 1642 - -
Bach8g00176 2050 PANTHER DNA POLYMERASE ZETA CATALYTIC SUBUNIT 7 1103 IPR030559 GO:0006281|GO:0016035|GO:0019985
Bach8g00176 2050 FunFam DNA polymerase 30 196 - -
Bach8g00176 2050 MobiDBLite consensus disorder prediction 845 868 - -
Bach8g00176 2050 FunFam DNA polymerase 1198 1499 - -
Bach8g00176 2050 PRINTS DNA-directed DNA-polymerase family B signature 1681 1689 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bach8g00176 2050 PRINTS DNA-directed DNA-polymerase family B signature 1625 1637 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bach8g00176 2050 PRINTS DNA-directed DNA-polymerase family B signature 1516 1529 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bach8g00176 2050 CDD DNA_polB_zeta_exo 1196 1438 - -
Bach8g00176 2050 CDD POLBc_zeta 1464 1912 - -
Bach8g00176 2050 ProSitePatterns DNA polymerase family B signature. 1683 1691 IPR017964 GO:0000166|GO:0003676
Bach8g00176 2050 Pfam C4-type zinc-finger of DNA polymerase delta 1949 2022 IPR025687 -
Bach8g00176 2050 SUPERFAMILY Ribonuclease H-like 27 1462 IPR012337 -
Bach8g00176 2050 Gene3D - 1221 1499 IPR036397 GO:0003676
Bach8g00176 2050 Gene3D - 1758 1923 IPR042087 -
Bach8g00176 2050 Gene3D Palm domain of DNA polymerase 1502 1747 IPR023211 -
Bach8g00176 2050 FunFam DNA polymerase 1758 1926 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00176 Bach-Chr8 1160209 1175355 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00176 1265 2029 Core DNA Replication Machinery Family AT5G63960 29.374 4.55e-82 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00176 K02350 - qsu:111995684 2087.77