Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00161 TTCCAAGAAAACATTATTAATCGTCACGAAAGCTGTGCTTTTCATATTTCTATTGAAACCCTAAATTTTTGTCCGCTATAAGACTTGGGACTTTCGCGGTACGGAAAAATATTACAAAAGAGCAGCTTATATCTTCGACCCAGCAGTATTCCCATGTCATAGATCTTTGAAAAAAAGATTCTGATTGTTATTTGTTTCTCTTTTCCTTTTCCCAGGTTCTGTATAATTGCAGAGCAGAGCACCACCTATTGGAGAAGAATGGATCACCAAGGGCATAGCCAGAACCAATCTATGGGGGTTGTTGGTAGTGGAGGTCAATTGGCGTACGGTTCAAACCCATACCAAGCAAACCAGATAACTGGGACAGCAGGGTCAGTTGTCACAACAGTTGGGGCCATTCAATCTGTTAATCAGCCTTCTGGAGCCCAGCTGGGACAACATCAACTTGCTTACCAGCATATTCATCAGCAACAACAGCAGCAACTTCAGCAACAACTCCAATCCTTCTGGGCAAATCAATACCAAGAAATTGAGAAAGTGACTGATTTCAAGAACCATAGCCTTCCCTTGGCGAGGATCAAGAAGATCATGAAGGCTGATGAGGATGTTAGAATGATATCAGCTGAGGCACCAGTCATATTTGCAAGAGCATGTGAAATGTTTATATTAGAGTTAACCTTGCGTTCATGGAATCACACTGAAGAGAACAAAAGGAGAACACTTCAGAAGAATGATATTGCAGCAGCAATCACAAGGACTGATATCTTTGATTTCTTGGTTGACATTGTTCCCCGGGAGGACTTGAAAGACGAAGTACTTGCTTCCATCCCTAGGGGAACAATGCCTGTTGCAGGGCCTGCTGATACCCTTCCATATTGCTATATGCAACCTCAGCATACCCCTCAAGTAGGCACTGGTGGTGTCATAATGGGTAAGCCTGTGATGGACCCAGCTATATATGCTCAACAGTCTCATCCCTACATGGCACAACAAATGTGGCCACATGCACCAGAACAGCGACAACCATCTCCGGATCGTTAAATGGATCACCAAGGGCATAGCCAGAACCAATCTATGGGGGTTGTTGGTAGTGGAGGTCAATTGGCGTACGGTTCAAACCCATACCAAGCAAACCAGATAACTGGGACAGCAGGGTCAGTTGTCACAACAGTTGGGGCCATTCAATCTGTTAATCAGCCTTCTGGAGCCCAGCTGGGACAACATCAACTTGCTTACCAGCATATTCATCAGCAACAACAGCAGCAACTTCAGCAACAACTCCAATCCTTCTGGGCAAATCAATACCAAGAAATTGAGAAAGTGACTGATTTCAAGAACCATAGCCTTCCCTTGGCGAGGATCAAGAAGATCATGAAGGCTGATGAGGATGTTAGAATGATATCAGCTGAGGCACCAGTCATATTTGCAAGAGCATGTGAAATGTTTATATTAGAGTTAACCTTGCGTTCATGGAATCACACTGAAGAGAACAAAAGGAGAACACTTCAGAAGAATGATATTGCAGCAGCAATCACAAGGACTGATATCTTTGATTTCTTGGTTGACATTGTTCCCCGGGAGGACTTGAAAGACGAAGTACTTGCTTCCATCCCTAGGGGAACAATGCCTGTTGCAGGGCCTGCTGATACCCTTCCATATTGCTATATGCAACCTCAGCATACCCCTCAAGTAGGCACTGGTGGTGTCATAATGGGTAAGCCTGTGATGGACCCAGCTATATATGCTCAACAGTCTCATCCCTACATGGCACAACAAATGTGGCCACATGCACCAGAACAGCGACAACCATCTCCGGATCGTTAATTGCTGCACCATGGAGATTAAGGTGAACTTTAGGGTCTCTTATATTTTTGTATTCCTCCCGGACTAGTGAGTGGAATTTCATGGTGAACTGTTCATTTCACTCTGAAGGATCCACCAGCTATTTACCTGCACTCTGAAGGATCATAGTTTGTTGTATCTGATTTCGTTAACCCTTGGTCTCTACCTTTCTTTCAGATTACTGGTGTTATGTTATGAGTTCAGAATGTCAACCTTTATGGCTGAAGAACGTCATTAGTAATCTGTAGTCATTAGTTGACACACAATGCAAATCTTATGTAGATAATGTGCTAGCTAAGACTTATCTTGATTAGGTTGGATGAGTTGCTGTCCTTTTCTTCATTTAATTTTCTCGTCTTTTGTTGGTAATAGTTACTTGAAGATGCATAGTCGGATTTTTACCTCCAA 2250 0.4316 MDHQGHSQNQSMGVVGSGGQLAYGSNPYQANQITGTAGSVVTTVGAIQSVNQPSGAQLGQHQLAYQHIHQQQQQQLQQQLQSFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADTLPYCYMQPQHTPQVGTGGVIMGKPVMDPAIYAQQSHPYMAQQMWPHAPEQRQPSPDR 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00161 260 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 62 198 - -
Bach8g00161 260 Gene3D Histone, subunit A 63 179 IPR009072 GO:0046982
Bach8g00161 260 Pfam Core histone H2A/H2B/H3/H4 62 164 IPR007125 GO:0003677
Bach8g00161 260 SUPERFAMILY Histone-fold 72 173 IPR009072 GO:0046982
Bach8g00161 260 FunFam Nuclear transcription factor Y subunit gamma 66 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00161 Bach-Chr8 1080280 1082501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00161 1 247 CCAAT-HAP5 Transcription Factor Family AT1G08970 61.290 8.68e-90 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bach8g00161 CBFD_NFYB_HMF 5.8e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00161 K08066 - gmx:100527803 424.476