Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00153 ATGAGCTATAACTCTTTTTCATGGATAACTCCACTTAGATCGAATTCGCGAGTTATTTCCCTGTGCCTCCTCCTCCTCTTGCCGGAGATTCCATTTGCCAGAGCACAACCCGTGACTAATGGCCAAAACGAACAGTACTACAACCGGTTCAGCCCCTCCATGGCTATCATCATCGTCATATTGGTTGCGGCTCTTTTCCTGATGGGCTTCTTCTCCATCTACATCCGCCACTGCGCTGACTCACCATCCAACAGTGTTCGGCCTCTTGGCGGCCCTGCCGGCCGTTCCAGGCGCGTCCCTCGTGGCCTTGATCCTGCAGTGATTGAGACGTTTCCAACTCTTGAGTACTCTGTAGTTAAGATACATAAGATTGGGAAAGATGCACTGGAATGTGCCGTATGCTTATGCGAATTCGAGGACACCGAAACTCTGCGTTTAATCCCAAAATGCGACCACGTTTTCCACCCGGAGTGTATCGATGAATGGTTGGCTTCTCACACCACCTGCCCCGTTTGTCGAGCTAACCTCATTCCACAACCGGGCGAGTCTGTGCACGGAATTCCTGTTCTAAACGCTGACTCAGATATCGAAGCACAAAACCAAAACGATGCCGTCGAAATTGCACCCATGCAACAGAATGCGGAGGTTGACCGGGAACAACCAGAGCTGGAGGTTGCAAGCGCAAATCGGACGCTGAACCGAAACCGTACGCGGAGGTCTCGGTCCAGCCGGACACAAAGGTTCTCGTTCCCTCGTTCACACTCGACCGGCCACTCACTCGTCCAACCGGGTGAAGACACGGAACGTTTCACTTTGAGACTGCCCCTGGAAGTGAGGAAACAATTAATAAACCAGAAATTGCATCGCGCCACAAGCTTAGTAATCTTGCCGAGAGAAACGAGTTCGAGGCGTGGCTATAGAACCGGCGACGATGGTAGTAGCAGGGGCTGGGTTTCCCGGCGGCTTGACCGGGGGTTCAAATCAGACAAGTGGGTTTTCACAATGGCGCCGCCATTCTTAGTGAGGGCATCATCGATTAGGTCTCCGAGGGTGGCTAATAGCGCCGGTGAAGGGACCTCCACTCAGCCCATAGTGCCGCGCTCAACTGAGTCCACGCGGCCACCGGTTTAA 1131 0.5314 MSYNSFSWITPLRSNSRVISLCLLLLLPEIPFARAQPVTNGQNEQYYNRFSPSMAIIIVILVAALFLMGFFSIYIRHCADSPSNSVRPLGGPAGRSRRVPRGLDPAVIETFPTLEYSVVKIHKIGKDALECAVCLCEFEDTETLRLIPKCDHVFHPECIDEWLASHTTCPVCRANLIPQPGESVHGIPVLNADSDIEAQNQNDAVEIAPMQQNAEVDREQPELEVASANRTLNRNRTRRSRSSRTQRFSFPRSHSTGHSLVQPGEDTERFTLRLPLEVRKQLINQKLHRATSLVILPRETSSRRGYRTGDDGSSRGWVSRRLDRGFKSDKWVFTMAPPFLVRASSIRSPRVANSAGEGTSTQPIVPRSTESTRPPV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00153 376 CDD RING-H2_EL5-like 130 173 - -
Bach8g00153 376 MobiDBLite consensus disorder prediction 348 376 - -
Bach8g00153 376 SMART ring_2 131 172 IPR001841 -
Bach8g00153 376 MobiDBLite consensus disorder prediction 246 262 - -
Bach8g00153 376 SUPERFAMILY RING/U-box 123 180 - -
Bach8g00153 376 ProSiteProfiles Zinc finger RING-type profile. 131 173 IPR001841 -
Bach8g00153 376 PANTHER RING FINGER DOMAIN-CONTAINING 37 182 - -
Bach8g00153 376 MobiDBLite consensus disorder prediction 213 266 - -
Bach8g00153 376 MobiDBLite consensus disorder prediction 348 369 - -
Bach8g00153 376 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 178 IPR013083 -
Bach8g00153 376 FunFam E3 ubiquitin-protein ligase ATL6 93 179 - -
Bach8g00153 376 Pfam Ring finger domain 130 173 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00153 Bach-Chr8 1042865 1043995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00153 18 362 Rapid Response to Elicitors AT3G05200 44.359 9.61e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00153 K10664 - gmx:100810865 471.085