Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00152 ATGTGTGTTCCTGAAGGAGAGAGAGATAGCGAGAGAGGCATGGCACTTGAAGCATTTGTTTATCCACAAGACCCATTTGGTTATGGTGGCAAAGACCTCTTCACCTCGTTAGGAGGAGGAGGAACCAACTGGGTTTATGACGATTTCAACCTTGGAAAACACGAAGAAGATCAAGGCACCATTGGTTTTCTCGATAACCAAACAGAAAATAATTATGCTTATGCAGACTGGAACTCTTCTTCTTCATCATCAATGTTACCCCACTTGAATGAATTGCATCTCTCCAATCCTAATTTCTCAGAGACCACCACCAACGCCAGTGACCCAACTCCGAGTGAACCCAACAACTTAGACAGCTCAACTTCCGTGGTTGCACGTCCTAAACGGCGTCGTGCAAGAAGCCGCAAGAACAAGGAGGAAATTGAGAACCAGAGAATCACTCACATTGCTGTGGAGCGCAATAGAAGAAAGCAAATGAACGAGTATCTCTCTGTCCTTCGTTCTCTGATGCCAGATTCATACGTCCACAGGAGTGACCAGGCTTCTATAATTGGAGGTGCCATTAATTTTGTCAAGGAGCTTGAGCAAAGGCTGCAATTCCTTGGTGCTCAGAAAGAAACTGCAGACGGGAAATGTAATGGCAGTGTAGCCATGCCCTTTTCAGAGTTCTTCACCTTTCCCCAGTATTCAATAGGTTCTAGTGGCTGTGATGCTAGTTCTGTGGCCAAAGGTGAGCAAGTGGGTGGTGAGGCTCAGAGTGGTATTGCTGATATAGAAGTGACAATGGTGGAGAGCCATGCAAATCTCAAAATAAGATCAAAGAAGCGACCAAAGCAGCTCTTGAAGTTGGTCTCTTGTTTACATACCATGCGTCTTACAATCTTGCACCTAAATGTCACAACCACTGCTGATATTGTCCTCTATTCTCTCAGTGTAAAGATAGAAGAGGACTGCAAACTGGGTTCAGTGGATGAGATAGCAGCTGCTGTATACCAAATGCTGGGCAGGATTCAACAAGAGGCAATGTTGAATTGAAGATTCAAACCTTGGACTAATTGGCTGCATTCTTTTTCTTTTCTCGCCTTAGATCTTAATTATTCAATGGGCAGTCTTTGTTTTGAAGGTTTAGCTAATTATTGTAACTTCTTTTCCTCCTTTTGTTGATTTATTCACTGATGGTGCCTTGATGTGGGGCTCCATATGGAGGGAGTTTTTTGGTCTCTTTGTCCTCTCCTGCTCTCTATCCTCCTATTTTCTCTGTGGGGAATGAGATTAGATTATATTGTGCTTGAGACATAAGTAAGTGCTTTGTCAAGTCTGC 1321 0.436 MCVPEGERDSERGMALEAFVYPQDPFGYGGKDLFTSLGGGGTNWVYDDFNLGKHEEDQGTIGFLDNQTENNYAYADWNSSSSSSMLPHLNELHLSNPNFSETTTNASDPTPSEPNNLDSSTSVVARPKRRRARSRKNKEEIENQRITHIAVERNRRKQMNEYLSVLRSLMPDSYVHRSDQASIIGGAINFVKELEQRLQFLGAQKETADGKCNGSVAMPFSEFFTFPQYSIGSSGCDASSVAKGEQVGGEAQSGIADIEVTMVESHANLKIRSKKRPKQLLKLVSCLHTMRLTILHLNVTTTADIVLYSLSVKIEEDCKLGSVDEIAAAVYQMLGRIQQEAMLN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00152 344 PANTHER MAX DIMERIZATION, MAD 78 341 - -
Bach8g00152 344 Gene3D - 127 209 IPR036638 GO:0046983
Bach8g00152 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 194 IPR011598 GO:0046983
Bach8g00152 344 MobiDBLite consensus disorder prediction 88 141 - -
Bach8g00152 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 208 IPR036638 GO:0046983
Bach8g00152 344 SMART finulus 149 200 IPR011598 GO:0046983
Bach8g00152 344 Pfam Helix-loop-helix DNA-binding domain 144 195 IPR011598 GO:0046983
Bach8g00152 344 Coils Coil 191 211 - -
Bach8g00152 344 MobiDBLite consensus disorder prediction 88 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00152 Bach-Chr8 1031807 1033372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00152 14 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 46.769 4.63e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach8g00152 HLH 3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00152 - - qsa:O6P43_011133 417.157