Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00110 ATGGAGCAGTATGAAATACTTGAGCAAATTGGAAAAGGTGCCTTCGGTTCTGCTCTACTCGTGAGGCATAAGCATGAGAAAAAAAAATACGTGCTGAAGAAGATTCGCCTTGCCCGACAAACTGAGCGGTCTCGTAGATCTGCACACCAGGAGATGGAGCTCATCTCTAAATTAAGAAATCCATTTATTGTGGAGTACAAAGATTCATGGGTAGAAAAGGGTTGCTATGTGTGCATTATTATAGGTTATTGTGAGGGCGGTGATATGGCAGAAGCTATAAAGAAAGCAAATGGTGTTCTTTTTCCTGAAGAGAAACTTTGTAAGTGGCTCGTTCAACTTTTAATGGCCCTTGACTACTTGCACATGAACCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTTTTGACGAAAGGTCAAGACATACGTCTTGGTGATTTTGGACTAGCTAAGATGCTGACTTCAGATGATCTTGCTTCCTCTGTCGTGGGAACTCCCAGCTACATGTGCCCTGAGCTCCTTGCTGATATACCTTATGGTTCCAAATCAGATATTTGGTCCTTGGGGTGTTGTATATATGAAATGACATCTCATAAACCTGCATTTAAAGCATTCGATATACAAGCGCTCATCAACAAGATTAACAAGTCCATAGTGGCTCCACTGCCAACAAAATATTCTGGTGCTTTTCGAGGTCTTGTTAAAAGCATGCTGCGGAAAAATCCGGAGCTTAGACCTAGTGCTGCAGAGCTGCTTGGACACCGACATCTTCAACCTTATGTATTCAAGATCCATCTCCAAATGAATAATCCCAGGCGAAGTTCATTACCGGTTCACTGGCCAGAATCCAACTATGTCAAGAAAACTAGATTTTTGGGGTTAGAAGCAGAACCTGTTTCCATCTATAGGGATAAGCGACATTCTTTAGGCAATGATCGGAATTTAAATCCTAGTGTATCTGGACCTGAAGATTCTGTATGCTCTACCCTAGAAATAGATTGTACCCCAGATCATTTGAATCAAAGGCTAGCTGAACTATCAGTTGGAGATAGCCATGAAGTGAAGTCCATCAAAACCTCTAATTTTGCCAGGACTCCAAGAATTACTTCATCTAAAGCTTCTGCCATCCCTAAGAAATCAATGGAACCCTCAAAGAATCGTGAGTCGCTTCCTGTTTCACGCAATGCGAGAAAATCTGTCCATACAACCCGCAGAGCATCATTTCCTCTGCCAACAAGAGTTGCTATCCAACGATCTCCTCGCCGTTCCAGAAGTGGTTTACTTGGCCCTGTAAAATCGCCAGACATTTCAGTCAACTCTCCCCGTATCGATAGGATGGCTGAATTCCCATTAGCATCATGTGAAGATCCGCCGTTTCCTATCGCTAGAGCTTCAAAATCTGCACAGGGTTCGCTGGGCTCCCCACATTGCGGTGATCCTTCAATCCTGAAGGACAAATACATGGTTCAGGTGTGCGATAGAGCATCTGTCAGGCCTAGGCCTAGTTTGACAGATGCTTGGCAGGGAATCAAGCGTAGCATGTTTTTGCAAAATAATGAGGACAAAAGTGGCTCCTTTGATCAAAATGCAACTGCTGGAGCATCAAGCCACAACTCTTCAGACTTGCGCGGCCGTCAGTTTGACACTTCATCTTTCCAACAAAGGGCTGAAGCCTTAGAAGGATTGCTTGAATTTAGTGCAAGATTGCTACAACAGGAAAGGTACGAAGAGCTTGGGGTTTTGTTGAAACCATTTGGGCCTGGAAAGGTATCCCCGAGGGAAACTGCTATCTGGTTGAGTAAGAGCTTTAAACAGAACACTCAAACGTGA 1833 0.4348 MEQYEILEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKLRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVLFPEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTKGQDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTSHKPAFKAFDIQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLGHRHLQPYVFKIHLQMNNPRRSSLPVHWPESNYVKKTRFLGLEAEPVSIYRDKRHSLGNDRNLNPSVSGPEDSVCSTLEIDCTPDHLNQRLAELSVGDSHEVKSIKTSNFARTPRITSSKASAIPKKSMEPSKNRESLPVSRNARKSVHTTRRASFPLPTRVAIQRSPRRSRSGLLGPVKSPDISVNSPRIDRMAEFPLASCEDPPFPIARASKSAQGSLGSPHCGDPSILKDKYMVQVCDRASVRPRPSLTDAWQGIKRSMFLQNNEDKSGSFDQNATAGASSHNSSDLRGRQFDTSSFQQRAEALEGLLEFSARLLQQERYEELGVLLKPFGPGKVSPRETAIWLSKSFKQNTQT 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00110 610 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Bach8g00110 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Bach8g00110 610 MobiDBLite consensus disorder prediction 361 440 - -
Bach8g00110 610 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 565 - -
Bach8g00110 610 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00110 610 FunFam Serine/threonine-protein kinase Nek2 84 274 - -
Bach8g00110 610 MobiDBLite consensus disorder prediction 361 378 - -
Bach8g00110 610 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Bach8g00110 610 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Bach8g00110 610 SUPERFAMILY Protein kinase-like (PK-like) 1 305 IPR011009 -
Bach8g00110 610 Gene3D Transferase(Phosphotransferase) domain 1 84 273 - -
Bach8g00110 610 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00110 610 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00110 610 MobiDBLite consensus disorder prediction 521 546 - -
Bach8g00110 610 CDD STKc_Nek 3 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00110 Bach-Chr8 756855 761133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00110 10 259 MAP Kinase Kinase Kinase AT1G53570 31.765 9.39e-36 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Bach8g00110 Pkinase 1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00110 K08857 - gmx:100804898 962.985