Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00100 TTAGAATGAGAAGCGGTGTAGAAGCAGAGCGGGATAAGTACGGTATGATTAATTTTGAAGAAACGGAATTGCGACTGGGCTTGCCTGGTCCCTCTGCAGATGACTCTGATTCTATCTTCAAGAACGCTGGCACCGCCCATGCCCATGGCAAGAGAGGCTTCTCTGAGACCACAAATGCTCCTGCTGTTGATTTGAAGCTCAACCTTTCCTCTTGTAATGACTTAACCTCACCCTCGGCTCCAAAGCCTAAAGACAAGATGAATACTGTAGCAACTGCTACTGCTATTGTTCCTGCTCCCCGCGCTAACGACCCAGCAAAGCCACCTGCAAAGGCACAAGTGGTAGGTTGGCCACCAGTCCGATCATTCAGAAAGAACATAGTGTCGGCACAAAAGAACAGCAATAGCGATGAAACAGCAGAGAAAGGCGGTGGTAGTAGCAGCAGCAAAAACCACCATAACAACAGTAACAGTACTGCAGCGGCTGCTTTCGTTAAGGTTAGCATGGATGGTGCACCATATCTACGCAAAGTGGACCTCAAGTTATACAAGAGCTACCAAGACCTCTCAGATGCCCTTACTAAAATGTTCAGCTCTTTCACCATTAATAGTAAATGTGGGTCACAAGGGATGAAGGACTTCTTGAATGAAAGAAAATTGATAGATCTTTTGAATGGTTCTGACTACGTACCAACATACCAAGACAAGGATGGAGACTGGATGCTCGTCGGTGACGTGCCCTGGGAGATGTTCGTTGAATCATGCCAGCGCTTGCGCATAATGAAAGGATCCGAGGCAATTGGACTAGCACCGAGGGCGGTGGAAAAGTGTAAAAACAGAAGCTGAACTCAAAATTTCGTAGTCTACTCGGGCGTTGAAAGCTGAAGGAGAAGCAACCCCGGTCCGAGCCTGCCAGGCTGAGTCTTGTATAGGAGTTTCCGATAATGCATGCATCTGTACCATGTTTTTTTGTTTGTCCCTTTTTAATTTGTTTTCTTATATATGTGTGTATGATATAGTATAACAACAGTTGGAATTTAATAGGGAGAAACAAGAAATAATGCATAAGATGTTTATATGACCCCCTTTTTTTGGTTTTTAAAAAGAATGTAACTTGGGCTATAATTGACGTGCTTGGTCAATAAT 1145 0.4437 MRSGVEAERDKYGMINFEETELRLGLPGPSADDSDSIFKNAGTAHAHGKRGFSETTNAPAVDLKLNLSSCNDLTSPSAPKPKDKMNTVATATAIVPAPRANDPAKPPAKAQVVGWPPVRSFRKNIVSAQKNSNSDETAEKGGGSSSSKNHHNNSNSTAAAAFVKVSMDGAPYLRKVDLKLYKSYQDLSDALTKMFSSFTINSKCGSQGMKDFLNERKLIDLLNGSDYVPTYQDKDGDWMLVGDVPWEMFVESCQRLRIMKGSEAIGLAPRAVEKCKNRS 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00100 279 MobiDBLite consensus disorder prediction 127 154 - -
Bach8g00100 279 FunFam Auxin-responsive protein 155 271 - -
Bach8g00100 279 MobiDBLite consensus disorder prediction 26 53 - -
Bach8g00100 279 SUPERFAMILY CAD & PB1 domains 156 260 - -
Bach8g00100 279 Gene3D - 154 273 - -
Bach8g00100 279 Pfam AUX/IAA family 19 270 IPR033389 -
Bach8g00100 279 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 16 266 IPR003311 GO:0005634|GO:0006355
Bach8g00100 279 ProSiteProfiles PB1 domain profile. 160 261 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00100 Bach-Chr8 698457 700822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00100 123 264 B3 DNA Binding Superfamily AT2G46530 29.577 2.87e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bach8g00100 AUX_IAA 1.5e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00100 K14484 - tcc:18600188 346.665