Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00099 CTCAGATCCATGGCTCTTCCACGTCCAATACTGCCAACAAACAATTAAACTCTTGTTCTTCCGATTCCTATACTATATGTAATGTAATTCTCCTGTAATTTTCTGCTAGTTCACTCGGTGGGCTTCTCTTTCTCGTTTGGATTCCCATGCGCCTTATACTTCTGTGACCCTTTTCGAGCTATGGCGAGCCAGCTGGTCAAAGTAAGGAGGGAGACGCTTGAAGCATGCATGACATGCCCTCTTTGTCATAAGCTCTTGAAGGATGCCACGACCATATCTCTTTGTCTTCATACATTTTGCAGGAAATGCATTTACGAGAAACTGTCAGATGACGAGACGGATTGCTGTCCTGTATGCAATATTGATCTAGGCTGTCTTCCGGTGGAAAAACTAAGGCCCGACCACAATTTGCAAGATATCAGGGCAAAAGTATTCCCTTTCAAAAGAAGAAAGGTGAAGGTCCCAGAAGTTATGCCTTCAATATCGCTGCCAGCGAAAAGGAAGGAAAGATCACTTTCATCATTGGTGGTTAGTGCTCCCAAAGTTCCAGTGCAGACTGGCTTTACTGGAAAGAGAACAAAAACCGGTACAAGAAAGGCTGCTGCTCTGCGAGGGTGTAATTTCACTATTGAAGAACACATTAAGAAGGAAGAAATATATCCCGAAGACAATCCAGTAAGCTCAAGCTCACCTGATTCATCAAATATCATTGCTCAAAATAATAGTCAGGATTCTTCCTTTGCTGAGCCTTCTAAGAAGCATATACCTAATGATGATACAGAAGAAAATGTGGACCTTACAGAAGGGAAAGGTGACCTCTGGACATCTTTGAACTGTCTTGTTGAAGCTGCCAACAGAACAAAATCCTCCAAGTTAAATTCACAAGGGATGTCTCTTGCCAAATTAGAGTTGCCATCTATTCCCAATGGTGGATTAGATAGACCCGGAGTCATGGCCAGACATGAGCCTCCTGCTGCCTTTCACCGTGATCTGCATATGCCTAAAGCCAAAAACAAGGATAATGGGGTTAAAATAAAAGTTGAAAATGAGATGAATGGAAACAGATTGCCTTCAGGACCAATGAAGCGTAGACGGGTGCGTCCTGCTGGTCCGAAAAAATCAGCAGCATCTGATATGTCTACCTCGGCCCAGGTCATGCTAAATGCAACTGGTGACAGGTGCAACCGAAAAAACAGTCCTATTTGGTTTTCATTAGTTGCTTCAGAAGACCAGAAAGGAGACGTTCCCTTCCCACAGATCTCAGCATGTTATTTAAGAATAAAGGATGGTACAATGCCTGTTTCGTTCATTCAAAAGTACCTAACAAAGAAACTTAGTCTCGCCAGCGAAGCAGAGGTGGAAATAATGTGCCGGGGTCAACCGGTGCTCCCATCTCTGCAACTACATAACTTGGTAGATATGTGGTTCCGAACAGCTTCGACCTCAAAAAAAATTCCAGCATCTGTGGGTTCCTCAGCCAAGGACTTTGTTATGGGCGGAGGATCAGATACGGAAGTGACATGGGAGGACCAACAGAATATTAACCAGTTCGGAAGGTTGAATAATCGCTTTCACGAGCTTGAGGATGAGATCAAAATCGCCAAGGAAACCAATGATAATTTGGAGGATGCAAGCAATGAGCTTATTCTCACAGATGAAGAGGTGGTTCGATTTCAATTAGGGGAGGTTTTGGCTCATGTGCCAAAGGATGAAGTTGAGAACAGGATAGAACAGATGAAAGAGGTGACAAGCAAGAAATTGGAAAAACTTGAAGAGGAGAAGGAATCTGTGCTTGCCCAGATGGCTGAACTGAAGAAAATTTTGTATGGGAAATTTAAGGACTCGATCAATCTCGAGGAGGATTAATATAGGTTCCTTGTTAATAAATTTCTATTTTTTCTTTTTGGTTTTGTTTTATATTTTCTTGCTACTGATTTCTATTGTTTCTAACTTTTTGTTAATATGATATGCTTGCTGCCGTCAACTTGGGTATTCTTCAGTTAGCTTTTC 2010 0.4224 MASQLVKVRRETLEACMTCPLCHKLLKDATTISLCLHTFCRKCIYEKLSDDETDCCPVCNIDLGCLPVEKLRPDHNLQDIRAKVFPFKRRKVKVPEVMPSISLPAKRKERSLSSLVVSAPKVPVQTGFTGKRTKTGTRKAAALRGCNFTIEEHIKKEEIYPEDNPVSSSSPDSSNIIAQNNSQDSSFAEPSKKHIPNDDTEENVDLTEGKGDLWTSLNCLVEAANRTKSSKLNSQGMSLAKLELPSIPNGGLDRPGVMARHEPPAAFHRDLHMPKAKNKDNGVKIKVENEMNGNRLPSGPMKRRRVRPAGPKKSAASDMSTSAQVMLNATGDRCNRKNSPIWFSLVASEDQKGDVPFPQISACYLRIKDGTMPVSFIQKYLTKKLSLASEAEVEIMCRGQPVLPSLQLHNLVDMWFRTASTSKKIPASVGSSAKDFVMGGGSDTEVTWEDQQNINQFGRLNNRFHELEDEIKIAKETNDNLEDASNELILTDEEVVRFQLGEVLAHVPKDEVENRIEQMKEVTSKKLEKLEEEKESVLAQMAELKKILYGKFKDSINLEED 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00099 561 SMART ring_2 19 59 IPR001841 -
Bach8g00099 561 MobiDBLite consensus disorder prediction 163 190 - -
Bach8g00099 561 FunFam Prefoldin subunit 4 444 554 - -
Bach8g00099 561 SUPERFAMILY Prefoldin 451 548 - -
Bach8g00099 561 Pfam Prefoldin subunit 451 554 IPR002777 GO:0006457|GO:0016272|GO:0051082
Bach8g00099 561 SUPERFAMILY RING/U-box 12 83 - -
Bach8g00099 561 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 1 438 IPR044807 GO:0004842
Bach8g00099 561 Pfam Zinc finger, C3HC4 type (RING finger) 19 59 - -
Bach8g00099 561 MobiDBLite consensus disorder prediction 157 205 - -
Bach8g00099 561 MobiDBLite consensus disorder prediction 291 321 - -
Bach8g00099 561 Coils Coil 457 494 - -
Bach8g00099 561 Gene3D - 322 424 - -
Bach8g00099 561 ProSitePatterns Zinc finger RING-type signature. 35 44 IPR017907 -
Bach8g00099 561 MobiDBLite consensus disorder prediction 191 205 - -
Bach8g00099 561 CDD RING-HC_PCGF 17 60 - -
Bach8g00099 561 Coils Coil 509 547 - -
Bach8g00099 561 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 111 IPR013083 -
Bach8g00099 561 ProSiteProfiles Zinc finger RING-type profile. 19 60 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00099 Bach-Chr8 689679 695042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00099 5 368 C3H Transcription Factor Family AT2G30580 46.322 6.21e-91 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00099 K16277 - qsa:O6P43_011217 642.114