Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00095 CTGATCTTCAGTTCTGCCATGGCCGTTGCTGCAGAGCCCAAGGCCAAGAAACCAGCCGCTACGAAGAAGCCCAAGTCCTCGCCGTCGCACCCTCCTTTCATTGAGATGATAACGGATGCAATTGTGACTTTGAAAGAGAGGACCGGTTCAAGCCAGTATGCCATCACCAAGTTTATAGAAGAAAAACATAAGCAGTTGCCACCCAATTTCAGGAAGCTTTTGCTTCATTATCTGAAAAAATCGGTCGGTGCTGATAAACTTGTTAAGGTCAAGAATTCTTTCAAGCTTCCACCAAATCGGTCGGCTCCGGTCAAGGCATCCGCTCCTGCTGCTACTAAGAAGCCTGCAAAAGTTGTGACTAAGGCTGCATCCAAGCCTAAAGCTGTTGCCACAAAGAAAATCGCTGCCTCAAGTGCCAAAGCGACCGCAAAGCGTAAGGAGACGGTAAAACCGAAAGCGAAGGCGACGGCTAAGCCAGCTAAGGTGGCTAAGACATCGGTGAAGGCTTCACCAGGGAAGAAAGTTGTCAAGGCAGTAAAGAAGACGTCGGTGAAGAAGCCTAGGAGTGTAAAATCACCGGTGAAATATGTACCGGCAAAGAAGGCTAAGAAGTGAAGCTGCG 622 0.4887 MAVAAEPKAKKPAATKKPKSSPSHPPFIEMITDAIVTLKERTGSSQYAITKFIEEKHKQLPPNFRKLLLHYLKKSVGADKLVKVKNSFKLPPNRSAPVKASAPAATKKPAKVVTKAASKPKAVATKKIAASSAKATAKRKETVKPKAKATAKPAKVAKTSVKASPGKKVVKAVKKTSVKKPRSVKSPVKYVPAKKAKK 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00095 198 FunFam Histone H1 18 104 - -
Bach8g00095 198 SMART h15plus2 21 87 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach8g00095 198 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 23 92 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach8g00095 198 Pfam linker histone H1 and H5 family 24 90 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach8g00095 198 MobiDBLite consensus disorder prediction 1 27 - -
Bach8g00095 198 PANTHER HISTONE H1 6 182 - -
Bach8g00095 198 MobiDBLite consensus disorder prediction 168 182 - -
Bach8g00095 198 PRINTS Histone H5 signature 10 31 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach8g00095 198 PRINTS Histone H5 signature 37 54 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach8g00095 198 PRINTS Histone H5 signature 115 129 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach8g00095 198 PRINTS Histone H5 signature 171 190 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach8g00095 198 MobiDBLite consensus disorder prediction 89 113 - -
Bach8g00095 198 CDD H15 21 103 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach8g00095 198 Gene3D - 19 98 IPR036388 -
Bach8g00095 198 MobiDBLite consensus disorder prediction 135 198 - -
Bach8g00095 198 SUPERFAMILY "Winged helix" DNA-binding domain 20 101 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00095 Bach-Chr8 678241 678955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00095 25 91 Single Myb Histone (SMH) Gene Family AT1G72740 35.821 7.90e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00095 K11275 - zju:107412213 132.88