Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00081 ATGTTGAGAGAAGTATTTGCTGGGCAAAAGCCCGAAACAAAAGAAAAAGACTACAAGGCAATCCCTGCTTCATCAGCAACTAGCAAACCAAAGTGCTTCTTCTTTCCCACCCCACCGATACTGCATCCATATCAAGCCCTGCTTGAGTCATATGCAATCAAGCTTTTGCTAGAAATGGAGGGAAAAACTGAGGAAGTGGAAGATGTTGAGAGTGTTTCTGATGGTTATTTGATTGATGATTCAGAAGATGATAGGTCTCCAACATCTGAAATAGACAACAGACTGCATGTTGAGGAGAGTTTGACTGAGGAAGAAATAGAAGACCTGATTGCTGAGTTGTTAGAAGTTGAGAGTAAGGCTGCAGAGGCCCAAGAAGCTCTTGAAGGGGAGTCCGTTGCCAAAGTAGAGAGTGATGTTAGACAAGAGCTGGAGCAAACTCTTCAAGGGGATGATTTGGAAACTGCTGTTGCAGAGGAGATGACTACTTTCAAAGAGGAATGGGAAGCTGTTCTAGATGACCTTGAAGTTGAAAGTGCCAACTTACTGGAACAACTTGATGGGGCTGGTATAGAGCTACCTAGCCTTTATAAGTGGATTGAAAGACAAGCCCCCAATGGTTGTTGCACTGAAGCTTGGAAAAAAAGGAATCATTGGGTGGGGTCTCAGGAAACTGCTGAACTTGTTGAATCAAAAGATGTTGCTGAGAAGTATCTGGAAATCCACAGACCTGTAAGAAGGCACCATGGTAAACTACTGGAAGAGGGTGCTAGTGGGTTTCTTCAAAAAAAACATTCCGATGCTACCATTGAGCCTGTAAAGGAAGAAACTGAGGTAGATTGGGGAATGTTCGAAAAAATATCTGCTGATGGGGGTGATACTGATACTTCATTTGGCAGTAAGCATTGGGCTTCTGTTTATTTGGCAAGTACTCCACAACAAGCTGCACTTATGGGGCTTGAATTTCCGGGAGTGGATGAGGTGGAGGAGATTGATGACCTTGATGGCATTTCTACCGATCCATTACTAGATCTTTCTGAAGAACAGAAGAAAAAATTTAAAAAGGTAAAAGAAGAAGATGACGTACAGGTTTTTCGGAAGCTTCAAATCCGCTTGAAACGGAGGAGACATCAAAAGAGAAATAAGCAGAGAGATGATGGGATGAAGACTGATAATATTGAAGGTTTTGACACCTGTAATATTCTTGATGAAGAAAAGGCTATGTGTACTGGTGCTTTGTCAGAGCTTTCCAAGCCTCCAGTGTCTGATGTTATTGAAAACAGAGGCATGAAACGCCACAATGATGGTGAAATAGATACTAATAGTAAAAAATGCCGAACCGTTATTGTTGATGGTGATGATGAAGCCAATGTCATTGAAGACAAGCTGACTCCCAATATGGAAGTGTTAAATGATCAATACAGGTTAAATGATGGTATAAGCACTGGTGATGCTAATGGTCTTCCTCCTGAGTGTCTGGACGAGAAGTTTCTCTGCACGGCTTGTGATAAAGTGATTCTTGAAGTGTACCCTCACCCTCTTTTGAAAGTGATCATTTGTGGGGATTGCAAATGCCTGATGGAAGAAAAGATACACGTGAAGGATCTGGACCCTGATTGTTCTGAGTGTTACTGTGCATGGTGTGGAGGAAGCACTGAGTTAGTTAGTTGTAAATCATGCAAAACATTATTTTGCACCAACTGTATAAAGAAGAATCTTGGTGTAGAATGCCTTCCTGAGATTCAAGCTACTGGCTGGCATTGTTGTTGCTGCCACCCAGATCTTCTGCAAAGACTGTCGTTACAGCTGGAGAAAGCTACAATATCTGCTGGTATCTTAGTTTCCAGCTCTGGTAGTGATTCTGATAGTTCAGATTCAGAGATTAATGTTACAATCAGTGCTAAGCGAAAACGCAAAAAGAAGATTAGGAGGATTCTTGATGATGCTGAATTAGGGGAAGAAACCAAAAGGAAAATTGCAATTGAAAAGGAACGTCAGGAACGCCTGGAGTCTTTGAGAGTGCAATTTTCTACCTCATCTGACGTGATGAGCTCTGCTGGCTATCATGGAAATTTGTCTGAAGGTTCCGGTATCGAAGTCCTTGGTGATGCAGTAACTGGTTATATAGTGAATGTCGTGAGGGAGAAAGGTGAAGAGGCTGTCAGAATTCCTCCTAGCATCTCAGCTAAACTGAAAGCCCATCAGATTACAGGAATAAGATTTATGTGGGAAAATATAATACAGTCAATCAGAAAAGTAAAGTCTGGGGATAAGGGTCTTGGTTGTATTCTAGCTCATACAATGGGCCTTGGTAAAACCATTCAGGTGATAGCTTTCTTGTACACAGCAATGAGAAGGGTTGATTTGGGGTTAAGGACTGCACTGATAGTGACACCAGTCAACGTACTGCACAACTGGAGGCAGGAGTTCATCAAGTGGAGACCTTCAGAATTAAAGCCGCTTAGAGTCTTCATGCTTGATGATGTACCAAGGGATAGGAGAGCAGAACTACTTGCAAAGTGGAGAGCCAAAGGTGGTGTCTTTTTGATTGGTTATACTGCTTTTCGAAATTTATCTTTTGGAAAGCATGTGAAAGATCGTGACATTGCCAGAGAAATTTGTCATGCTTTGCAGGATGGGCCAGACATACTTGTTTGTGATGAAGCCCATATGATAAAGAATACAAGAGCTGACATAACTCAAGCCTTGAAACAAGTAAAATGCCAGAGAAGAATTGCACTGACTGGATCACCCCTTCAGAACAATCTCATGGAATATTATTGTATGGTTGATTTTGTAAGAGAAGGTTTTCTTGGAAGCAGCCATGAATTTAGGAACCGCTTCCAAAACCCCATAGAGAATGGTCAACATACTAATTCAACTCTGGATGACGTGAAGATTATGAACCAGAGGTCTCATATTCTGTATGAACAGTTAAAAGGCTTTGTCCAAAGAATGGACATGAATGTGGTGAAGAAAGATTTGCCGCCAAAAACTGTCTTTGTGATAGCTGTCAAACTTTCTCCCCTTCAGAGAAAACTGTATAAGAGATTCCTTGATGTGCATGGATTTAATGATGAGAAAGGTTCTAATGAAAAGCTAAGAAAGAGAAGTTTTTTTGCTGGGTACCAGGCATTAGCTCAGATATGGAACCACCCTGGAATCTTGCAATTGACGAAAGAAGAGAAGGACTATGTTAAACATGAACATGCTGTTGAGAATTTTCTTGTGGATGACAGCTCCAGTGACGAAAATTCAGATTACAATGTGCTCATTGGAGAGAAAATGAAATATGCAAATGATTTTCTGCAAGGGAAAGATGATAATGGCTATTTCTCGAAGGGGTGGTGGAATGATCTTCTTCATCAAAAAAATTACAAGGAGCTTGATTACAGTGGCAAAATGGTTTTGCTGCTGGACATATTAACCATGAGTTCTGATGTGGGCGATAAGGTGTTAGTTTTTAGCCAGAGCATACCGACCCTGGATCTTATAGAACTTTATCTATCAAGGTTACCTCGAGGAGGAAAACAAGGGAAATGTTGGAAAAAAGGAAAAGATTGGCTGGATGGAAGGACGGAGAGCTCTGAAAGGCAGAAGCTTGTTGAGAGGTTTAATGAACCCTTGAATAAGAGGGTAAAATGTACTCTGATTTCAACCAGGGCTGGCTCTTTGGGTATTAATCTTCATGCAGCTAACCGTGTTGTTATAGTTGATGGTTCTTGGAATCCAACCTATGATCTCCAGGCAATCTATCGAGCTTGGAGGTATGGCCAGAAAAAGCCTGTTTTTGCTTACCGATTGCTGGCACATGGAACTATGGAAGAGAAAATCTATAAGCGGCAGGTAACAAAGGAGGGGCTTGCTGCGAGAGTGGTTGATAGACAACAGGTTTATAGGACAATGTCTAAAGAAGAGATGTTACATCTGTTTGAGTTTGGTGATGATGAAAACCCCGAGACTTTGACTGAATTGACTGACGAGAATGGTCATACCTTAGAGCAAAATAATTCTTTTTTAGTTGGGCACTCACTCAAACATACGGTACCACATTCTAATGGAAGCAGCTATTCTGATAAGTTGATGGAAGGCTTAATTAGCCAGCATCATCCACGGTGGATTGCTAATTACCATGAACATGAAACCCTTTTACAAGAGAATGAAGAGGAAAAGTTATCAAAAGAGGAGCAAGACATGGCTTGGGAAGTATATCAGAAAACGCTGGAATGGGAGGAAGTGCAGAGAGTACCACTTTGCGAGTCTGTGCCTAATCAAAAGGCAGAAACACCAAATGCGCCACCCCCTGTATTAGAAACCCGCAGCGTATCGCCAACAAGGGTGAGGAATCGTTTCATGATACGGAAATGCACCAATCTTTCACATTTGCTGACACTTAGAAGCCAGGGCACGAAATTTGGTTGCACTACCGTGTGTGGGGAATGCGCCCAGGAGATAAGATGGGAAGATTTGAAAAGTAAAGATTGGAGAATAGCCAAGTGAAGGATGACATCATCTGGACTGTATATGTCTATATTAGGTTAGATGATTAATTTGCTCTTGTTGTGAAAGGTTGAAACGCATCTTCAAAATCTCTTTTTGGAAAAATAGAAATGTGTTGGGCTATTAAGGAAGGGAACTGAGAGGATATAATTGCAGGAGAGGCTTAGCCTAGAGGGATAACGCAGTTAAAGTGTATGTAATTATTCAACGCTGATTGCATCAGCTTCACCTTAAAACCTACTGTTTCATATTATTAAGAGAAAACGGCGGAACAAAAC 4775 0.4136 MLREVFAGQKPETKEKDYKAIPASSATSKPKCFFFPTPPILHPYQALLESYAIKLLLEMEGKTEEVEDVESVSDGYLIDDSEDDRSPTSEIDNRLHVEESLTEEEIEDLIAELLEVESKAAEAQEALEGESVAKVESDVRQELEQTLQGDDLETAVAEEMTTFKEEWEAVLDDLEVESANLLEQLDGAGIELPSLYKWIERQAPNGCCTEAWKKRNHWVGSQETAELVESKDVAEKYLEIHRPVRRHHGKLLEEGASGFLQKKHSDATIEPVKEETEVDWGMFEKISADGGDTDTSFGSKHWASVYLASTPQQAALMGLEFPGVDEVEEIDDLDGISTDPLLDLSEEQKKKFKKVKEEDDVQVFRKLQIRLKRRRHQKRNKQRDDGMKTDNIEGFDTCNILDEEKAMCTGALSELSKPPVSDVIENRGMKRHNDGEIDTNSKKCRTVIVDGDDEANVIEDKLTPNMEVLNDQYRLNDGISTGDANGLPPECLDEKFLCTACDKVILEVYPHPLLKVIICGDCKCLMEEKIHVKDLDPDCSECYCAWCGGSTELVSCKSCKTLFCTNCIKKNLGVECLPEIQATGWHCCCCHPDLLQRLSLQLEKATISAGILVSSSGSDSDSSDSEINVTISAKRKRKKKIRRILDDAELGEETKRKIAIEKERQERLESLRVQFSTSSDVMSSAGYHGNLSEGSGIEVLGDAVTGYIVNVVREKGEEAVRIPPSISAKLKAHQITGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTIQVIAFLYTAMRRVDLGLRTALIVTPVNVLHNWRQEFIKWRPSELKPLRVFMLDDVPRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRDIAREICHALQDGPDILVCDEAHMIKNTRADITQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTLDDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIAVKLSPLQRKLYKRFLDVHGFNDEKGSNEKLRKRSFFAGYQALAQIWNHPGILQLTKEEKDYVKHEHAVENFLVDDSSSDENSDYNVLIGEKMKYANDFLQGKDDNGYFSKGWWNDLLHQKNYKELDYSGKMVLLLDILTMSSDVGDKVLVFSQSIPTLDLIELYLSRLPRGGKQGKCWKKGKDWLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTMSKEEMLHLFEFGDDENPETLTELTDENGHTLEQNNSFLVGHSLKHTVPHSNGSSYSDKLMEGLISQHHPRWIANYHEHETLLQENEEEKLSKEEQDMAWEVYQKTLEWEEVQRVPLCESVPNQKAETPNAPPPVLETRSVSPTRVRNRFMIRKCTNLSHLLTLRSQGTKFGCTTVCGECAQEIRWEDLKSKDWRIAK 1498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00081 1498 Coils Coil 1376 1396 - -
Bach8g00081 1498 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 752 935 IPR014001 -
Bach8g00081 1498 SMART ultradead3 726 947 IPR014001 -
Bach8g00081 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 990 1327 IPR027417 -
Bach8g00081 1498 MobiDBLite consensus disorder prediction 1 22 - -
Bach8g00081 1498 Gene3D - 995 1338 IPR027417 -
Bach8g00081 1498 Pfam Helicase conserved C-terminal domain 1135 1257 IPR001650 -
Bach8g00081 1498 Coils Coil 99 126 - -
Bach8g00081 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 716 984 IPR027417 -
Bach8g00081 1498 Gene3D - 703 984 IPR038718 -
Bach8g00081 1498 PANTHER RAD54-LIKE 80 1492 IPR044574 GO:0016887
Bach8g00081 1498 Pfam SNF2-related domain 752 1054 IPR000330 GO:0005524|GO:0140658
Bach8g00081 1498 ProSiteProfiles ADD domain profile. 486 618 IPR025766 -
Bach8g00081 1498 CDD ADDz_ATRX 494 592 - -
Bach8g00081 1498 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1139 1305 IPR001650 -
Bach8g00081 1498 MobiDBLite consensus disorder prediction 64 90 - -
Bach8g00081 1498 Coils Coil 164 191 - -
Bach8g00081 1498 SMART helicmild6 1162 1257 IPR001650 -
Bach8g00081 1498 CDD SF2_C_SNF 1127 1268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00081 Bach-Chr8 584948 603833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00081 760 1310 RAD5 or RAD16-like Gene Family AT5G43530 25.276 7.26e-29 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach8g00081 SNF2_N 1.9e-52 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00081 K10779 - gmx:100794911 2149.01