Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00060 ATGGATTCCTCTGGCTTCTTGATTCCATACCCAAATTTCGACTCCCAATCCCTTCCCTTTAATGAGAATGACCCACAAGAAATGCTTCTTTATCAAGTTCTGGCCCAAGCCAGTGCCACGGATTCCTTGGAAATAACAAAAACAACAAGTGCATCATCATCAACAACATCAGCATCTCATTCAGGAGACGGCCCTGTGGAAGCAGAGTATTCTATTAAAGAGCAAGTTTCTTACAGAGGGGTCCGAAGACGGCCGTGGGGGAAATACGCGGCAGAGATAAGGGACTCTACTAGAAGTGGTGTGAGAGTTTGGTTGGGAACATTTGACACTGCTGAGGCAGCTGCTTTGGCTTATGACCAAGCTGCATTAGCAATGAGAGGTTCAGCTGCTGTCCTCAATTTCCCACCTCACATCGTCCATCAATCTCTTGAGAAAATGAACTATGCTCTCCATGTCCAAAATGGCTCCTCTCCTGTTCTCGAGTTAAAAAAGAGGCATTCCATTAAGAGAAAATCGGAGACCAAGAAGATGAAAAAGAACAAGGAGGAGCTCAGCTCGGATAACATGGTCGTATTCCAGGATCTAGGGGCTGACAGTTTGGAACAGCTTCTTACTTCGTCGGAGGATGCCACTACCACCTAG 642 0.4626 MDSSGFLIPYPNFDSQSLPFNENDPQEMLLYQVLAQASATDSLEITKTTSASSSTTSASHSGDGPVEAEYSIKEQVSYRGVRRRPWGKYAAEIRDSTRSGVRVWLGTFDTAEAAALAYDQAALAMRGSAAVLNFPPHIVHQSLEKMNYALHVQNGSSPVLELKKRHSIKRKSETKKMKKNKEELSSDNMVVFQDLGADSLEQLLTSSEDATTT 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00060 213 SMART rav1_2 77 141 IPR001471 GO:0003700|GO:0006355
Bach8g00060 213 CDD AP2 78 137 IPR001471 GO:0003700|GO:0006355
Bach8g00060 213 FunFam Ethylene-responsive transcription factor 2 76 137 - -
Bach8g00060 213 Pfam AP2 domain 78 127 IPR001471 GO:0003700|GO:0006355
Bach8g00060 213 MobiDBLite consensus disorder prediction 45 66 - -
Bach8g00060 213 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Bach8g00060 213 PRINTS Ethylene responsive element binding protein signature 101 117 IPR001471 GO:0003700|GO:0006355
Bach8g00060 213 SUPERFAMILY DNA-binding domain 78 136 IPR016177 GO:0003677
Bach8g00060 213 Gene3D AP2/ERF domain 77 136 IPR036955 GO:0003700|GO:0006355
Bach8g00060 213 ProSiteProfiles AP2/ERF domain profile. 77 135 IPR001471 GO:0003700|GO:0006355
Bach8g00060 213 PANTHER DNA-BINDING DOMAIN 52 205 IPR044808 GO:0003700|GO:0009873
Bach8g00060 213 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00060 Bach-Chr8 447022 447663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00060 18 212 AP2-EREBP Transcription Factor Family AT3G23240 49.495 2.08e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach8g00060 AP2 2.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00060 K14516 - qsu:112003251 211.846