LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach8g00059	ATGGCGAACCGGTGGTGGACGGGGTCTGCGGGGCTGGCCGGACTTGAAAACTCTGCTAACTCTCCCCCCTTGAAGAGACCAGATCTAGGTATCTCCATCAATGGCAGTAGTGGTGGGCGTGGCGACGAAGAAGAAGAGAAAGAAAACAATGATGAGCCTAAAGAAGGGGCTATTGATGTGGCGACTACGCGCCGCCCAAGAGGGCGTCCACCGGGCTCGAAGAACAGGCCAAAACCACCCATATATGTGTCGAGGGAGAGCCCTGACGCACTTCGAAGCCATGTGATGGAGATAGCAAACGGAGCCGATATTGCTGACTGTGTGGTTCAGTTCGCTAGAAGGCGTCAAAGAGGAGTATGCGTTCTCAGTGGCAGCGGCACCGTCATCAACGTCACTCTTCGCCAAACAAACAGCCCTGGTGCCGTTATGGCACTTCACGGCCGCTTCGAGATACTATCATTGACAGGTTCGTTTCTTCCTGGACCGGCCCCACCAGGTACTACCGGTTTAACCATATACCTGGCCGGAGTTCAAGGTCAAGTGGTTGGAGGTGTGGTCGTGGGTCCCCTGCTGGCATCAGGTCCTGTTATGATAATGGCAGCTACCTTTTCCAATGCCACCTATGACAGATTACCCATCGAGGATATTGAAGAGGAAGCCCAAGGACAACTGAATGCCGGCGGTGGCAGTGGATCTCCTCCCATTCACGACGGCAATGGCGGCCAGCTGTCAGGTCCAGGTGGGAAAGTTGGGGAGTCTTCCTCATCTATTCCGGTTTATAATCTTCAGTCGAATATGCTTGGTAACGGTGCACAATTGAATCATGAAGCTTATAATTGGGCTCATGGCAGGTCATCGTATTAA	864	0.5312	MANRWWTGSAGLAGLENSANSPPLKRPDLGISINGSSGGRGDEEEEKENNDEPKEGAIDVATTRRPRGRPPGSKNRPKPPIYVSRESPDALRSHVMEIANGADIADCVVQFARRRQRGVCVLSGSGTVINVTLRQTNSPGAVMALHGRFEILSLTGSFLPGPAPPGTTGLTIYLAGVQGQVVGGVVVGPLLASGPVMIMAATFSNATYDRLPIEDIEEEAQGQLNAGGGSGSPPIHDGNGGQLSGPGGKVGESSSSIPVYNLQSNMLGNGAQLNHEAYNWAHGRSSY	287

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach8g00059	287	Gene3D	-	91	221	-	-
	Bach8g00059	287	MobiDBLite	consensus disorder prediction	1	85	-	-
	Bach8g00059	287	ProSiteProfiles	PPC domain profile profile.	88	223	IPR005175	-
	Bach8g00059	287	PANTHER	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	42	282	IPR014476	GO:0003680
	Bach8g00059	287	PIRSF	ESCAROLA	14	287	IPR014476	GO:0003680
	Bach8g00059	287	SUPERFAMILY	AF0104/ALDC/Ptd012-like	89	217	-	-
	Bach8g00059	287	MobiDBLite	consensus disorder prediction	223	255	-	-
	Bach8g00059	287	FunFam	AT-hook motif nuclear-localized protein	91	219	-	-
	Bach8g00059	287	CDD	DUF296	92	175	IPR005175	-
	Bach8g00059	287	Pfam	Plants and Prokaryotes Conserved (PCC) domain	92	205	IPR005175	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach8g00059	Bach-Chr8	438329	439192	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach8g00059	1	287	AT-hook Motif Nuclear Localized (AHL) Family	AT4G14465	55.705	5.88e-94	277

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach8g00059	-		-	qsu:112038015	346.665

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