Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00023 ATGGGTTTAATAGTGGAAGAGGGAGTAGATGACGACATTCTTGTTCCGCCGCCCAATTTCTGTATGGTTGAGGACGGCATTTTTCGATCGAGCTTTCCTCAACCCTCAAATTTCGGCTTCCTTCAAACCCTAAATCTTCGATCCATCATTTACTTGTGTCCTGAGCCCTACCCACAAGAAAATTTGGAGTTTCTTCAATCGCAAAATATTCGGCTCTTTCAATTTGGAATTGAAGGGAAGACGGAGATTTCTGTGTCTATTCCCAAGGATACTGTGATGGAGGCACTGAAAGTTTTAATTGATGTGAGAAATCACCCAGTTTTGATACATTGCAAACGAGGAAAGCATCGAACAGGTTGCCTTGTTGGTTGCTTGAGAAAGTTGCAGAATTGGTGTTTGTCTTCTGTGTTTCAGGAGTACCAGCGATTTGCTGGAGCTAAATCCAGGGCAACGGATTTAAGTTTTATAGAAATGTTTGACGTGTTATGCCTGAGGCAGTGCCTTTACAGCATCATATACCAGTACCAAGGATATGGTTCAAAGAAGAGGCGGTTGTTGTATAGGGAAGAGAATCTGCAGAAGCCCCAAGTGACATCAGTTTAGCTTGTCGGGGTTTGACACCTTTCAATGAGTTGGTAGAGATTATCTTTGTTGCTTCTTTATCATCAGTCAAAAATCATCATTCATTGAACTTGCGTTTCCACTGATTTTTTTTAACAATGCTGTGAAAGAAAACAAATCTGCTCTTCT 750 0.412 MGLIVEEGVDDDILVPPPNFCMVEDGIFRSSFPQPSNFGFLQTLNLRSIIYLCPEPYPQENLEFLQSQNIRLFQFGIEGKTEISVSIPKDTVMEALKVLIDVRNHPVLIHCKRGKHRTGCLVGCLRKLQNWCLSSVFQEYQRFAGAKSRATDLSFIEMFDVLCLRQCLYSIIYQYQGYGSKKRRLLYREENLQKPQVTSV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00023 200 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 14 160 IPR029021 -
Bach8g00023 200 Gene3D Protein tyrosine phosphatase superfamily 13 162 IPR029021 -
Bach8g00023 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE 14 171 - -
Bach8g00023 200 Pfam Tyrosine phosphatase family 14 161 IPR004861 -
Bach8g00023 200 ProSiteProfiles Dual specificity protein phosphatase domain profile. 19 168 IPR020422 GO:0006470|GO:0008138
Bach8g00023 200 ProSitePatterns Tyrosine specific protein phosphatases active site. 109 119 IPR016130 GO:0016311|GO:0016791
Bach8g00023 200 PRINTS Plant and fungal dual specificity phosphatase signature 14 31 IPR020428 GO:0016791
Bach8g00023 200 PRINTS Plant and fungal dual specificity phosphatase signature 51 64 IPR020428 GO:0016791
Bach8g00023 200 PRINTS Plant and fungal dual specificity phosphatase signature 70 84 IPR020428 GO:0016791
Bach8g00023 200 PRINTS Plant and fungal dual specificity phosphatase signature 87 101 IPR020428 GO:0016791
Bach8g00023 200 CDD PFA-DSP_Siw14 14 160 - -
Bach8g00023 200 FunFam probable tyrosine-protein phosphatase At1g05000 13 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00023 Bach-Chr8 175075 177022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00023 1 200 Protein tyrosine phosphatase (PTP) family AT3G02800 68.473 2.68e-104 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00023 K18045 - qsa:O6P43_007759 357.451