Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00008 ATGGGGTCTATGAACTGGTTGGGTTTCTCCCTGTCCTCTCAAGAGCTTCCGTCCCAGGCTGTCGGTAATCAAGATCACAGTCAAAGCAGCGCCGCCTTCAACTCTGAGGAAGTCTCCGGCACTCATGTCTCTGGAGAGTGCTTTGATCTCACTTCTGACACGGCGGCTCATTCATTCAACCACCTCCCTCCCTCTTTTGCCATATTTGAAGCATTCAACAGGAATACTAGTACTCATAAATATCATAATCATACTCAAGATTGGAACACAATAAGGCTAAAGGGATTGGAGGAAAAGTACAAGAGTAGTGAGAGCAGTGGCATGGTAATGGGCAGTTTATACAGTGGCCAAAACCTGGACAAGAGTCAACAAGAGCCGCCTAAACTTGAAAACTTTCTAGGCAGACGCTCTTTTTCTGAAAATCAGGACCACCACGCTACCTCTGCCTCTGTCGGTGATTTCATGTTCTCAAACGTCTGTTCTTTACAACTTCCAGCAGATCAGACCGCTGAAACATCAAGCCGCGGTGTCGGTGCTACTAGTTCCATTGGATTGTCCATGATAAAGACATGGCTCAGGAACCAACCAATTACTCCATCACAAAACTCAGACAACAATAATAATGATTCCAGTGCTGCCGGCGGCACTAGCACTCAGTCTTTATCGCTTTCTATGAGTAGCCTCCTGCCCAATGAGAGTTTCCCGTCGGATAATAAGCAGCCCACCACCACCACCAACTCCACGGGCCTTGATACTCAGAGTCAGACCCCATCTGTTGATCAGGCTATGCCAAGAAAATCCATTGATACCTTTGGTCAGAGAACTTCCATATACCGTGGCGTAACAAGGCATAGGTGGACGGGCAGATATGAGGCTCACCTTTGGGATAATAGTTGTAGAAGAGAGGGCCAAACTCGAAAAGGAAGGCAAGGTGGTTATGATAAAGAAGAAAAAGCAGCTAGAGCTTATGATTTAGCGGCACTAAAGTACTGGGGAACAACCACAACAACAAACTTCCCAATTAGCAACTACGAAAAAGAGTTGGAAGAAATGAAGCATATGACCAGGCAAGAGTATGTTGCATCGTTGAGAAGGAAGAGCAGTGGGTTTTCCCGTGGCGCATCCATATATCGAGGAGTGACGAGACATCACCAACATGGTAGATGGCAAGCTAGGATTGGAAGAGTTGCAGGCAACAAAGATCTCTACTTGGGAACGTTTAGCACACAGGAAGAGGCAGCAGAGGCATACGATATTGCAGCCATAAAGTTCCGAGGACTGAATGCAGTGACAAACTTCGACATGAGCAGGTACGACGTGAAGAGCATACTGGAGAGCAGCACTTTGCCAATTGGTGGAGCGGCTAAGCGTCTCAAAGAACATGTGGAGCTGCAGCCCGAAATCAGAAACACGGAACATCATGGTCCACATGATCATGACGATAGCTCCCATGCAAATGGAATCACCAACAATATTAACGTCGTCTTTGGACATGGATGGCCTAATTCTCTTGCGTTCCCTAATTCTCAGCCTCAGCATTACGCCATGCACTACCCCTATTATGGATCACAGTCACAAGGATTATGGTGCAAGCAAGAACAAGATTCTGATGCCTCTCACTGCCATGGCAGTTTTCTAGATCTTCATCAACCTCAATTAGGGATTAATACCCACAATTTGTTTCCTTCTGCTGCTGCTAACAATTTGCAGAATATGAATATCATGACGACTATGGATTCATCTGCTAATTCCATGGACAATAGCTGTGGATCTAACTCGGTCAATATTTATGGCGCGGATCATGGATATGGGGGCAGTACTGGGAGTAGCGGGTACGTGATTCCCATGGCAACTACTTCTCATGTCATTGCGAATGATCATGGTAACCAAAACCAAACGTGTAATGGTTTTGGTGATGAAAACCAAAACGTGTTTTGCTCTGCCGACCCCTATCATGCTGCTCGCAACTTGTATAGTTATTCTTCGGGAGATGCACTGGTTAAGGCCTGCACATACGTCGACCAAGGCAACACTAATTGGGTGCCCACTGCTGTTCCTAGATCGTCGTCTTCCAATGTGTCTCTCTGCCCCGGAGCTTCACCTTTCGCATTGTAG 2115 0.4652 MGSMNWLGFSLSSQELPSQAVGNQDHSQSSAAFNSEEVSGTHVSGECFDLTSDTAAHSFNHLPPSFAIFEAFNRNTSTHKYHNHTQDWNTIRLKGLEEKYKSSESSGMVMGSLYSGQNLDKSQQEPPKLENFLGRRSFSENQDHHATSASVGDFMFSNVCSLQLPADQTAETSSRGVGATSSIGLSMIKTWLRNQPITPSQNSDNNNNDSSAAGGTSTQSLSLSMSSLLPNESFPSDNKQPTTTTNSTGLDTQSQTPSVDQAMPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQGGYDKEEKAARAYDLAALKYWGTTTTTNFPISNYEKELEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESSTLPIGGAAKRLKEHVELQPEIRNTEHHGPHDHDDSSHANGITNNINVVFGHGWPNSLAFPNSQPQHYAMHYPYYGSQSQGLWCKQEQDSDASHCHGSFLDLHQPQLGINTHNLFPSAAANNLQNMNIMTTMDSSANSMDNSCGSNSVNIYGADHGYGGSTGSSGYVIPMATTSHVIANDHGNQNQTCNGFGDENQNVFCSADPYHAARNLYSYSSGDALVKACTYVDQGNTNWVPTAVPRSSSSNVSLCPGASPFAL 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00008 704 Gene3D AP2/ERF domain 277 342 IPR036955 GO:0003700|GO:0006355
Bach8g00008 704 Gene3D AP2/ERF domain 376 436 IPR036955 GO:0003700|GO:0006355
Bach8g00008 704 MobiDBLite consensus disorder prediction 195 271 - -
Bach8g00008 704 Pfam AP2 domain 277 332 IPR001471 GO:0003700|GO:0006355
Bach8g00008 704 Pfam AP2 domain 376 426 IPR001471 GO:0003700|GO:0006355
Bach8g00008 704 SUPERFAMILY DNA-binding domain 276 342 IPR016177 GO:0003677
Bach8g00008 704 MobiDBLite consensus disorder prediction 469 484 - -
Bach8g00008 704 CDD AP2 276 342 IPR001471 GO:0003700|GO:0006355
Bach8g00008 704 SMART rav1_2 376 440 IPR001471 GO:0003700|GO:0006355
Bach8g00008 704 SMART rav1_2 277 346 IPR001471 GO:0003700|GO:0006355
Bach8g00008 704 FunFam AP2-like ethylene-responsive transcription factor ANT 276 342 - -
Bach8g00008 704 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 122 532 - -
Bach8g00008 704 CDD AP2 375 436 IPR001471 GO:0003700|GO:0006355
Bach8g00008 704 MobiDBLite consensus disorder prediction 469 488 - -
Bach8g00008 704 SUPERFAMILY DNA-binding domain 375 436 IPR016177 GO:0003677
Bach8g00008 704 ProSiteProfiles AP2/ERF domain profile. 277 340 IPR001471 GO:0003700|GO:0006355
Bach8g00008 704 ProSiteProfiles AP2/ERF domain profile. 376 434 IPR001471 GO:0003700|GO:0006355
Bach8g00008 704 PRINTS Ethylene responsive element binding protein signature 278 289 IPR001471 GO:0003700|GO:0006355
Bach8g00008 704 PRINTS Ethylene responsive element binding protein signature 416 436 IPR001471 GO:0003700|GO:0006355
Bach8g00008 704 FunFam AP2-like ethylene-responsive transcription factor 375 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00008 Bach-Chr8 77692 81758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00008 127 518 AP2-EREBP Transcription Factor Family AT5G17430 56.456 5.98e-135 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bach8g00008 AP2 3.8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00008 K09285 - qsu:111984882 731.48