LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach7g01728	ATGGATGAGGTCGGCCGTGGTAATAAAGCCGAGCAGCCTCAGTCCAGAGACTTGGGCTATGCGGGCGACTCCTTATCTTCATCTACACCATCAATGGGATTAGGATGGCGTCCGAGCAAGCTTGTGTTTACTCCGTATGTCCCACTGGCCGAAACTACTGACAAGTCCCAGACTTTGCGTGTCGTTGTGAGGAGACCCTTCGTGGCAAGATTGACCAAGGAAATTGTTGAAACATACCAAATATGCAATCCGCAGTTTAAGTATTCTGAAGAGCTAAATCCAAAAAGATTTCTGACTAGTCCATCAGTTGGAGTGCTTAATGATGGCTATGATAACATAAACTCAGATCTTATTCTGACAGTGAACTTTGTCTTGATCAATCTAGAGAGAAATAGAAGATATATTGTCAAAGATGTCCTTGGCCATGGGACATTTGGACAAGTGGCCAAATGTTGGGTTCCAGATACTAATAGTTTTGTTGCTGTGAAGATCATTAAAAATCAACCTGCATACTATCAACAAGCACTGGTTGAAGTATCTATTTTGACAACGTTAAATAAGAAGTATGATCCTGAGGATAAGTATCACATTGTTCGTATATATGATTATTTTGTATATCAACGACATTTGTGTATATGCTTTGAACTACTGGATACAAACTTGTATGAGCTAATCAAAATGAATCATTTCAGAGGATTATCTTTGAGTATTGTTCAGTTGTTCTCTAAGCAGATTTTACGTGGATTGGCTCTATTAAAAGATGCTGGCATTATTCATTGTGACCTGAAGCCAGAAAACATTCTTTTATGTACAAGTGTGAAACCAGGAGAAGTCAAGATTATTGACTTTGGATCTGCATGCATGGAAGACCGCACTGTTTACTCCTACATTCAGAGTCGATACTATAGATCTCCAGAAGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCTGAATTGTTTCTTGGTTTACCATTATTTCCTGGGGCTTCAGAATTTGATCTTTTGAGGCGGATGATTGAAATACTTGGTGGACAGCCACCGGATTATGTTCTGAGGGATGCTAAAAACACTAGCAAATTCTTTAAGTGCATCGGGAGTGTCCAGAACATTGAGAGCAATGAAGTTTGCACAAATGGAAGAAGTGCTTATCAAGCATTGACAGAGGAAGAATACGAATCTAGAGAGTTGAAAAAGCCATCAATTGGGAAAGAGTATTTTAATCATATGAATCTTGAAGCAATAGTGACAAACTATCCCTACCGGAAAAACTTGCCTAAGGAAGATATTGTCAAAGAAAGTCAAATAAGATTAGCTCTTATTGATTTTTTGAGAGGACTCGTGGAATTTGATCCTGCAAAACGCTGGTCACCCTTCCAGGCTTCAAAACATCCTTTTGTAACAGGGGAACCTTTTACACATCCATACAAGCCTCCCCCTGAGACCCCTCGTGTGCCGGTTGTTCAAAATATCAAAGTGGACCATCACCCTGGTGGAGGGCACTGGTTTGCTGCTGGTTTGTCACCAAATGTGCCTGGCAAAAACATAGCTTCTCGGTATAGCAGTCCACACTTTCAGTTGGTGCAATATCCCCCTGCTAATAGTTATGGTAGTGTTGGAAGCCATGGTAGCTATAATGATAATATTGGCCTTGGCAGCAGCTACGGAAGTTATGGAGATAGCAATAACATGTTTGCTTATTATTCACCTGTCGGACCCTCTGGTATGCATATGCATGGTCAGAGCAGTACATCAATCCTTGGAAATAGTCCTGATGCACGGAGGAGAGTTATTCAATACCAGCCTGGTAATGGGCTGGGTGTTAGTCCATCAGCTGCAAATTTTGCCCCCTTGCACCTTGGTGCCAGTCCCTCACAATTTACTCCTCCAAGTTCCTATGCTCAAGTTTCAGCAGGATCTCCTGGACACTATGGACCTACTTCTCCTGCAAGAGGCACATCTCACGGGTCACCTTTGGGGAAGACTGCTGCAGTTAGCCAATTTAATAGAAGAAAAAATTGGGGATATTCTGGAAGTCATCAAACTCAAGAAACAACAGTTTCTTCACATTGGCAAGGCCAATGTCCTGACAGCTCCAGCCTCGCAGAGGGAACATCCCAAGTTCTTAGCGGTTCTCCATCTTATCTGCAGTCAAATTCTAATGCTGCAAGCTGGAAACAGCGAGGAGGAGGAGGGATATCTGCAGGATACACTGCTAATCAGAACATGACAAGCTTGTTTATGCCTAGTTCTAACATGAACTTGCAATCAGCAGACTTGGCACATGACAGTTTGGAGACGGGTTTATCACTGCCTGATCCTGGAGATTGGGATCCTAATTATAGTGATGAACTTCTTCTGCAAGACGATGGTTCAGATGGAAGCTGCTTGACAACTGAGTTTGGCAGAAATATGAATCTTGGCTCGACAGAACCATTGGTTGGAGTTGGAAGGTTTAACCATCCCTCAAGCACAAGTTCTCCTATATCCATACACAGACTAAATGGACCAGTACAAGCATTTTCTAATGTAGAAATGGGTAGTCCTCCAGCTCATGAACCTCAAGGAGGGTATAATCGCAAGCCTTTCCATCTCATGCCTCGGATTTTACAAAATTCGCCCAGCCGTTTTGGACAGCAACCTGTTCAAAGATTCGCTCATGGTAGACCCATTCGGAGTGGTGAGTGGAATCAAATCAAGGTCCAGGCTCCTCCTTCTGGTTTCGGGAGTGGGGGCCCACGTTCTCCTAGAAATAACTCATTCAACAATAGTATGACATGGGGGCGAAGAGGCAATCATCCTGTCACAAGCATACCACCTACATCCCGTGCAAGAAAAGACTATGCAAGGATAGACTAGCACTAGTTCAGCTTGGCATTTCGGCATGATGGGGGTTAGCATACAAAGGAAAAGAAAGAAAGAAGGGGGCGAAAAAGGATCCATAAAACAAAGAAAGAAAAAGAGAGGGTGTGAGCGAGGGGAGAAATAAAAAAAAAAAATGGTTCAGTAGTATAGGCGGTTGTGCCAGAGAGGAGAGAAAAG	3069	0.4282	MDEVGRGNKAEQPQSRDLGYAGDSLSSSTPSMGLGWRPSKLVFTPYVPLAETTDKSQTLRVVVRRPFVARLTKEIVETYQICNPQFKYSEELNPKRFLTSPSVGVLNDGYDNINSDLILTVNFVLINLERNRRYIVKDVLGHGTFGQVAKCWVPDTNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDPEDKYHIVRIYDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSLSIVQLFSKQILRGLALLKDAGIIHCDLKPENILLCTSVKPGEVKIIDFGSACMEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEILGGQPPDYVLRDAKNTSKFFKCIGSVQNIESNEVCTNGRSAYQALTEEEYESRELKKPSIGKEYFNHMNLEAIVTNYPYRKNLPKEDIVKESQIRLALIDFLRGLVEFDPAKRWSPFQASKHPFVTGEPFTHPYKPPPETPRVPVVQNIKVDHHPGGGHWFAAGLSPNVPGKNIASRYSSPHFQLVQYPPANSYGSVGSHGSYNDNIGLGSSYGSYGDSNNMFAYYSPVGPSGMHMHGQSSTSILGNSPDARRRVIQYQPGNGLGVSPSAANFAPLHLGASPSQFTPPSSYAQVSAGSPGHYGPTSPARGTSHGSPLGKTAAVSQFNRRKNWGYSGSHQTQETTVSSHWQGQCPDSSSLAEGTSQVLSGSPSYLQSNSNAASWKQRGGGGISAGYTANQNMTSLFMPSSNMNLQSADLAHDSLETGLSLPDPGDWDPNYSDELLLQDDGSDGSCLTTEFGRNMNLGSTEPLVGVGRFNHPSSTSSPISIHRLNGPVQAFSNVEMGSPPAHEPQGGYNRKPFHLMPRILQNSPSRFGQQPVQRFAHGRPIRSGEWNQIKVQAPPSGFGSGGPRSPRNNSFNNSMTWGRRGNHPVTSIPPTSRARKDYARID	961

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach7g01728	961	CDD	PKc_YAK1	134	476	-	-
	Bach7g01728	961	SMART	serkin_6	134	476	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach7g01728	961	Gene3D	Phosphorylase Kinase; domain 1	99	214	-	-
	Bach7g01728	961	ProSiteProfiles	Protein kinase domain profile.	134	476	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach7g01728	961	SUPERFAMILY	Protein kinase-like (PK-like)	129	497	IPR011009	-
	Bach7g01728	961	PANTHER	DUAL SPECIFICITY PROTEIN KINASE	83	479	-	-
	Bach7g01728	961	Gene3D	Transferase(Phosphotransferase) domain 1	215	477	-	-
	Bach7g01728	961	MobiDBLite	consensus disorder prediction	682	736	-	-
	Bach7g01728	961	MobiDBLite	consensus disorder prediction	910	961	-	-
	Bach7g01728	961	FunFam	Dual specificity tyrosine-phosphorylation-regulated kinase 1A	97	213	-	-
	Bach7g01728	961	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	257	269	IPR008271	GO:0004672\|GO:0006468
	Bach7g01728	961	ProSitePatterns	Protein kinases ATP-binding region signature.	140	163	IPR017441	GO:0005524
	Bach7g01728	961	MobiDBLite	consensus disorder prediction	635	670	-	-
	Bach7g01728	961	MobiDBLite	consensus disorder prediction	1	32	-	-
	Bach7g01728	961	MobiDBLite	consensus disorder prediction	682	738	-	-
	Bach7g01728	961	MobiDBLite	consensus disorder prediction	635	651	-	-
	Bach7g01728	961	MobiDBLite	consensus disorder prediction	921	948	-	-
	Bach7g01728	961	Pfam	Protein kinase domain	135	476	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach7g01728	Bach-Chr7	26157466	26174431	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach7g01728	133	362	MAP Kinase Gene Family	AT3G18040	34.286	6.69e-31	126

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_DYRK-YAK	Bach7g01728		Pkinase	9.3e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach7g01728	K18670		-	qsa:O6P43_001700	1555.42