LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach7g01691	ATGGCGGCGGTGAATGGGAATTCTTTGCCACCATTCTTGAGCAAGACCTATGACATGGTGGACGACGCGTCTACCAACTCGGTTGTATCGTGGAGTGATAACAATAACAGCTTCATCGTTTGGAATGTGCCCGAACTCGCCAGGGATATCTTGCCTAAATATTTTAAGCATAACAACTTCTCCAGCTTCGTCAGGCAATTGAATACTTACGGGTTTAGAAAGGTAGACCCAGACCGCTGGGAATTTGCAAATGAAGGATTTTTAAGGGGCCAAAAACAACTTTTAAAGAGTATCAATCGGAGGAAACCAGCTCATATAAATGGTAATCAACAATTACCTCCGGTGCAGAACTCAACTGTTGGTGCATGCATTGAAGTGGGGAAATTTGGGCTTGAGGAAGAGGTTGAAAGACTGAAAAGGGATAAGAATGTTCTTATGCAGGAACTTGTTAGGTTGAGACAGCAACAGCAAACAACTGATAACCAATTGCAAAGTGTTGGGCAACGTGTGCAGGCAATGGAGCAGCGTCAGCAACAGATGATGTCATTCTTGGCTAAGGCTATGCAGAGTCCAAGCTTCTTTGCTCAGTTTGTGCAGCAGCAAAATGAAAGTAACAGACATATTGCTGGAGGCAATAAAAAGAGGCGACTTGCCCGGCAGGATGAAGATAATTTAGCCGCTGAACATCTCCATAATGCTCTTGATGGACGTGTTGTCAAGTACCAGCCTTCTATGAATGAGGCAGCAAAAGCATTATTTCGCCAGATATTGCAAATGGACACTTCTGCAAGGATGGAGTCATCAATGAAGAACGCTGATGCATTCCTTATTGATGATGTTCCTTCTGCCATAGCATTAGATAGCAGGAGTTCCTCCAGTCAGATTTCTGGAGTGACCCTTTCTGAGGTTCATGTTCCACCTACTTCTGGGCAGTCTTACACGGCAGTAGAATCAGAATTTCCAGTCAATTGTATGCCTAATGGCATATCCAAGATGCAGTCTTCCAATGCTGTCTTGACTGACTGCATAAAAGCAACTGAGTTTCCAGAATTGGATCTGCATAATTGCCAGGATAATGTTTTGGATTTTGGTGAAGTTCAAGGGTTGGACACAGAAAGCAGTTTAGTGGAACCTGATCTAAATTTTGTGGGGCCTGACGCAGGGAATATTGCGGATTTAGATATGATGTCAGCAGTTTTGGATGGGACACATTCTGTAGAAGCTGATGCTTATTCACCCGATCCAGATGTAATTTCTAAGCTCCCAGGTATCAATGATGCATTCTGGGAACAGTTTCTCACAGCAAGCCCACTAACTGGAGATACAGATGAAACTGATTCTAGCTCTCCAGTAGATGGTTTGACTAAAGACAAGGACTTTCCATCGGAAAATGAGAATGGACAGGAAAAGATGGATAGGAGACATCATATTGATCATCTTACTGAACAGATGGGATTACTTGCATCAGAATCTTCTTAA	1479	0.4314	MAAVNGNSLPPFLSKTYDMVDDASTNSVVSWSDNNNSFIVWNVPELARDILPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKQLLKSINRRKPAHINGNQQLPPVQNSTVGACIEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDNQLQSVGQRVQAMEQRQQQMMSFLAKAMQSPSFFAQFVQQQNESNRHIAGGNKKRRLARQDEDNLAAEHLHNALDGRVVKYQPSMNEAAKALFRQILQMDTSARMESSMKNADAFLIDDVPSAIALDSRSSSSQISGVTLSEVHVPPTSGQSYTAVESEFPVNCMPNGISKMQSSNAVLTDCIKATEFPELDLHNCQDNVLDFGEVQGLDTESSLVEPDLNFVGPDAGNIADLDMMSAVLDGTHSVEADAYSPDPDVISKLPGINDAFWEQFLTASPLTGDTDETDSSSPVDGLTKDKDFPSENENGQEKMDRRHHIDHLTEQMGLLASESS	492

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach7g01691	492	PANTHER	HEAT SHOCK TRANSCRIPTION FACTOR	7	301	IPR027725	-
	Bach7g01691	492	ProSitePatterns	HSF-type DNA-binding domain signature.	51	75	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
	Bach7g01691	492	MobiDBLite	consensus disorder prediction	436	492	-	-
	Bach7g01691	492	PRINTS	Heat shock factor (HSF) domain signature	50	62	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
	Bach7g01691	492	PRINTS	Heat shock factor (HSF) domain signature	12	35	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
	Bach7g01691	492	PRINTS	Heat shock factor (HSF) domain signature	63	75	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
	Bach7g01691	492	SMART	hsfneu3	8	101	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
	Bach7g01691	492	Pfam	HSF-type DNA-binding	12	101	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
	Bach7g01691	492	SUPERFAMILY	"Winged helix" DNA-binding domain	7	101	IPR036390	-
	Bach7g01691	492	Coils	Coil	128	155	-	-
	Bach7g01691	492	FunFam	Heat shock transcription factor 1	5	102	-	-
	Bach7g01691	492	MobiDBLite	consensus disorder prediction	450	481	-	-
	Bach7g01691	492	Gene3D	-	4	102	IPR036388	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach7g01691	Bach-Chr7	25927876	25930938	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach7g01691	7	491	HSF	AT5G16820	52.295	1.27e-154	447

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HSF	Bach7g01691		HSF_DNA-bind	5.9e-32	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach7g01691	K09419		-	qsa:O6P43_001765	643.269