Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01677 ATGGGGACACGACCACAGCAAACATGTCCAGAGGAAGAGGAGGAGGAGCTACCAGGTCGTGGAACAACAATTTCGGGCCAATCAATGTCAACAAGCAGAAGTGTTGGGTCACCATCCAGCCGGAGTGAGCAGACAATGGCAACACCAGCCAGTGATAACACTTTTCTCAGATTAAACCATCTTGACATCCATGGTGATGATGCTGGATTACAGGGAGCAGTTGGTAGCAAAAAGAAAAAGAGAGGCCAACGTGCTGTTGGGGGTGATAAGAGTGGAAGAGGGCTCCGCCAGTTTAGTATGAAAGTGTGTGAGAAGGTGGAAAGCAAAGGAAGAACCACTTATAATGAGGTAGCAGATGAACTTGTGGCGGAGTTTGCTGATCCAAACAATAGTGTTTCCTCTCCAGATCAGCAACAATATGATGAAAAGAATATCCGTAGAAGGGTATATGATGCTTTGAATGTTCTCATGGCAATGGACATTATTTCTAAGGATAAAAAGGACATACAGTGGAAGGGTCTTCCTCGTACGAGTCTGAATGATATTGAAGAGCTAAAGACGGAACGTCTTGGGCTTAGGAATAGGATCGAAAAGAAAGCAGCCTATCTGCAAGAGCTGGAGGAACAATACGTCGGTCTTCAGAACCTCATACAACGTAATGAACAGTTATATAATTCAGGAAATGCTCCCAGTGGAGGTGTAGCTTTACCTTTTATTCTGGTTCAGACACGCCCTCATGCAACTGTTGAAGTGGAAATATCAGAGGATATGCAACTTGTACATTTTGATTTCAACAGTACTCCTTTTGAGCTGCATGATGACAACTACGTTCTCAAGGCAATGAAATTTTGTGAGAGACCACAGTGTGATAATATGGGGCAGAGTCTTACGGATGGAGGTGAAGGTTCTAGCATGTCAGGTTTGTATCAGGCGCAGGTTCCTCCTCCTGTTTCAAACCCTCCTGCCAGACCTCCCACTTCACCACCACTCCCAGGAATATTGAAGGCACGAGTTAAGCATGAGCACTAA 1029 0.45 MGTRPQQTCPEEEEEELPGRGTTISGQSMSTSRSVGSPSSRSEQTMATPASDNTFLRLNHLDIHGDDAGLQGAVGSKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPNNSVSSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKDIQWKGLPRTSLNDIEELKTERLGLRNRIEKKAAYLQELEEQYVGLQNLIQRNEQLYNSGNAPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCERPQCDNMGQSLTDGGEGSSMSGLYQAQVPPPVSNPPARPPTSPPLPGILKARVKHEH 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01677 342 MobiDBLite consensus disorder prediction 294 342 - -
Bach7g01677 342 Pfam E2F/DP family winged-helix DNA-binding domain 93 173 IPR003316 GO:0005667|GO:0006355
Bach7g01677 342 PIRSF Txn_factor_DP 4 342 IPR015648 GO:0005667|GO:0051726
Bach7g01677 342 Gene3D Transcription factor DP 179 299 IPR038168 -
Bach7g01677 342 FunFam Transcription factor-like protein DPB 179 303 - -
Bach7g01677 342 Coils Coil 189 223 - -
Bach7g01677 342 MobiDBLite consensus disorder prediction 294 313 - -
Bach7g01677 342 PANTHER TRANSCRIPTION FACTOR DP 22 294 IPR015648 GO:0005667|GO:0051726
Bach7g01677 342 SMART DP_2 180 340 IPR014889 -
Bach7g01677 342 SUPERFAMILY E2F-DP heterodimerization region 179 291 IPR037241 -
Bach7g01677 342 MobiDBLite consensus disorder prediction 1 53 - -
Bach7g01677 342 MobiDBLite consensus disorder prediction 314 331 - -
Bach7g01677 342 MobiDBLite consensus disorder prediction 21 53 - -
Bach7g01677 342 SUPERFAMILY "Winged helix" DNA-binding domain 93 174 IPR036390 -
Bach7g01677 342 SMART E2F_TDP_2 90 173 IPR003316 GO:0005667|GO:0006355
Bach7g01677 342 Pfam Transcription factor DP 181 287 IPR014889 -
Bach7g01677 342 Gene3D - 85 178 IPR036388 -
Bach7g01677 342 FunFam Transcription factor-like protein DPB 85 178 - -
Bach7g01677 342 MobiDBLite consensus disorder prediction 69 93 - -
Bach7g01677 342 CDD DP_DD 178 281 IPR014889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01677 Bach-Chr7 25842455 25846051 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01677 74 282 E2F-DP Transcription Factor Family AT5G02470 54.286 3.84e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Bach7g01677 DP 7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01677 K04683 - qsu:112000390 573.548