LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach7g01653	ATGTCATTGAACTTGGCTATGAGAGTTCCTAGACCTAGTGGATCAGGAGATAGACAAGAAGCTTCGTGCTCTCACAAGAAGAAAAGATCCAGTAAGCGTCACACTGATGAACAGATAAAAGTACTGGAAAGCTTTTTCAACGGATGCCCGCATCCAGATAAAGATCAACAGCTCGAATTAAGCAGGATTGTGGGGCTTGAGCAGCATCAAATAAAGTTTTGGTTTCAGAATAAGAGGACTCATACAAAGGCTCAAATTGAGAGATCAAGCAACGATTTTCTTCGGGCTCAGAATGAAAATATTAACATCGAAAACCTTGCAATTAAAGAGGTACTCAAGAGTCTAAAATGCAAATCTTGTTCGGGTGCAGTTTTTGCAGAAAATAGAGACGAACAACTTCTGCAAAACCTGCATCTGGAAAATACCCTACTAAAAGAAGAGTATGAGAAAGTATGTAGCCTACTTTCAACGTACACTGGGAAACCAGTATCAGAACTTGTGGCGCTGGCTTCTGCCCTAGGATCTACGTTGGATCTACTGCCAGGAATTTCGGCAAATGATGAGATTGGAAGTTCTGGTTCAGTTCCTGCAACTTCTGGCAGTAATAATATCATGCTGCATTACTGTATGAGTGGGATTACAAATGGGGAAAGGGCAGTAATGTTAGAGATTGCTACTAGTGCTACCAAAGAATTAGTTAGGCTTCTGCGTGATGATGAGATCTTATGGGTCAAGTCTGCAGTCGATGGGAGATTATTTCTTCGTCGCAACATCTATGAAGAAATATTTCCTAATACTTATCACCTCAAAAGTTCTACCGCACATAGAGAATCTTCAAAAGACTCAAGAATAGTGAGCATGAGTGCAATGCAATTGGTTGGCATGTTTTTAGATTCGGATAAATGGGTTGCTCTTTTCCCAACAATTGTTACAAATGCAAAAACAATCCATGTTCTTCAAAGTGGTTTGCCAGAAAACCGAGATGGGGCCTTGCAGCTGATGCATGTACAAACTCACATTCTTTCTCCCTTGGTGCAACCTCGGGAGTTTCTCTTCCTTCGCCATTGCCAGCAAATTGAGTCAGGCATATGGGTGGTCATGGATGTGTCAATTGATGAATTGAGAGAGAATTATACCTCCTGTCCTCGCTGTTGGAAGCTTCCTTCTGGTTGCATGATTCAACAAATGCCAAATGGGACCTCCATGATTACGTGGGTCGAGCATGTGGAAGTGGATGAGAAAACCCAAATTCACGCTCTATACAGGGATCTTCTTGGTAGCAGTGTTGCTTATGGAGCTGAAAGATGGGTTATGACACTTGAAAGAATGTGTGAGAGATTTGAATATTCCTTTCGTGAAAGTTTACCCAGTCAAGAAGCTTTGGGAGTGGTCAGTTTACCTGAAGGTAGGAGGAGCATTGTGAAGCTTGCTCATCGGATGATCAAGAATTTTTGTGAAATGCTAAACATGTCAGGTAAGATGGATTGCCCTAATTCTGAGGCAAAGATTCATGGAGTTCAGGTCTCTGTTTGCAAGAACACAGAACCACACAAACCAGATGGTGTGATTGTCAGTATGGCTACCTCCCTTTGGCTTCCTCTTCCTTATGAGAGTGTTTTTGACTTCATCAAAGATGAAAAGAAACGAGCTCAGTGGGATGTCCTTTGCAATGGAAATAGGCCACATGAGATTGCACACATCTCAAATGGAGCTAATCCAGGGAACTATACATCAATTATTCAGCCTTTCAATCTTTCGGAAATCAAACTATTGATTCTTCAAGAGACTTGTATAGACCCCTTGGGATCTGTGCTTGCCTATGCTCCCATTGATATGTCAGCTCTAAATGTGGCTATATGTGGAAAAGACTGTTCAGAAGTGCCAATTCTTGCATCTGGGTTTCTTTTCTCGAAAGATGGTCAACCTAACACAGTGGGTGAAGCATCAAGCAGCAGAAATGTTGGTGGGTCAGTGATGACAGTAGCTTATCAAATATTGATTTCAACTTCATTGTCAGCAACGGAATTAAACACAGAATTAGTCGCAGCTGTGAATGCACTTCTATGCTCCACAGTCGAAAAGATAAAGGATGCTTTGAGTTGTTCTGGACTGGATTAA	2118	0.4164	MSLNLAMRVPRPSGSGDRQEASCSHKKKRSSKRHTDEQIKVLESFFNGCPHPDKDQQLELSRIVGLEQHQIKFWFQNKRTHTKAQIERSSNDFLRAQNENINIENLAIKEVLKSLKCKSCSGAVFAENRDEQLLQNLHLENTLLKEEYEKVCSLLSTYTGKPVSELVALASALGSTLDLLPGISANDEIGSSGSVPATSGSNNIMLHYCMSGITNGERAVMLEIATSATKELVRLLRDDEILWVKSAVDGRLFLRRNIYEEIFPNTYHLKSSTAHRESSKDSRIVSMSAMQLVGMFLDSDKWVALFPTIVTNAKTIHVLQSGLPENRDGALQLMHVQTHILSPLVQPREFLFLRHCQQIESGIWVVMDVSIDELRENYTSCPRCWKLPSGCMIQQMPNGTSMITWVEHVEVDEKTQIHALYRDLLGSSVAYGAERWVMTLERMCERFEYSFRESLPSQEALGVVSLPEGRRSIVKLAHRMIKNFCEMLNMSGKMDCPNSEAKIHGVQVSVCKNTEPHKPDGVIVSMATSLWLPLPYESVFDFIKDEKKRAQWDVLCNGNRPHEIAHISNGANPGNYTSIIQPFNLSEIKLLILQETCIDPLGSVLAYAPIDMSALNVAICGKDCSEVPILASGFLFSKDGQPNTVGEASSSRNVGGSVMTVAYQILISTSLSATELNTELVAAVNALLCSTVEKIKDALSCSGLD	705

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Bach7g01653	705	SMART	START_1	223	446	IPR002913	GO:0008289
Bach7g01653	705	SUPERFAMILY	Homeodomain-like	26	93	IPR009057	-
Bach7g01653	705	PANTHER	HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1	26	699	IPR042160	-
Bach7g01653	705	Pfam	START domain	224	446	IPR002913	GO:0008289
Bach7g01653	705	Gene3D	-	265	424	IPR023393	-
Bach7g01653	705	ProSitePatterns	'Homeobox' domain signature.	60	83	IPR017970	GO:0000981\|GO:0006355
Bach7g01653	705	CDD	START_ArGLABRA2_like	218	445	-	-
Bach7g01653	705	CDD	homeodomain	28	85	IPR001356	GO:0003677
Bach7g01653	705	ProSiteProfiles	START domain profile.	214	449	IPR002913	GO:0008289
Bach7g01653	705	ProSiteProfiles	'Homeobox' domain profile.	25	85	IPR001356	GO:0003677

Showing 1 to 10 of 17 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach7g01653	Bach-Chr7	25685653	25689530	Transposed

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach7g01653	26	700	Homeobox Transcription Factor Family	AT1G73360	42.158	9.41e-180	528

Showing 1 to 1 of 1 entries

Previous1Next

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HB-HD-ZIP	Bach7g01653		START	8.2e-35	CL0209

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach7g01653	K09338		-	qsa:O6P43_014240	762.296

Showing 1 to 1 of 1 entries

Previous1Next