Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01637 ATGGCGTTTCCCAACCAATCCATGTCAGTTTCTCCTCAGAGAAAGATGGGAAGGGGAAAGATTGAGATCAAGAGGATTGAGAACACCACCAATCGCCAAGTCACCTTCTGTAAGCGCAGAAATGGCCTGCTCAAAAAGGCATATGAGTTATCTGTGCTTTGTGATGCTGAGGTTGCTCTAATCGTCTTCTCTACCCGTGGACGCCTCTATGAATATGCTAATAACAGTGTCAAAGCAACTATTGAGAGGTACAAGAAGGCATGTTCAGATTCTACTAATGGTGGATCATCTTCTGAGGCTGATGCCAAGTATTACCAGCAAGAAGCTGCCAAACTGCGAATGCAAATCAGCAACCTTCAGAATAACAACAGGCAAATGATGGGTGAGGCTTTGGGCAATCTGTCTGTCAAGGACCTTAAAAACCTGGAGACTAAATTAGAAAAAGGAATTAGCAGAATTCGTTCCAAAAAGGAAATTGACTTGCACAATAATAACCAGCTTCTTCGAGCAAAGATAGCTGAAAGTGAGAGAAGCCAACATAACATGAACTTGTTGCCTGGAAGCTCAAGCTATGAAGTTATGCAGTCTCATCAGCAACCATATGACTCTCGAACCTACTTCCAAGTGACTGGGTTGCAACCCAGTAATCAGTATTCGAAGCAAGACCAGATGGCCCTTCAATTAGTGTAA 690 0.4319 MAFPNQSMSVSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKATIERYKKACSDSTNGGSSSEADAKYYQQEAAKLRMQISNLQNNNRQMMGEALGNLSVKDLKNLETKLEKGISRIRSKKEIDLHNNNQLLRAKIAESERSQHNMNLLPGSSSYEVMQSHQQPYDSRTYFQVTGLQPSNQYSKQDQMALQLV 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01637 229 SUPERFAMILY SRF-like 17 89 IPR036879 GO:0003677|GO:0046983
Bach7g01637 229 PANTHER SERUM RESPONSE FACTOR HOMOLOG 16 183 - -
Bach7g01637 229 ProSiteProfiles K-box domain profile. 102 199 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach7g01637 229 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 25 72 IPR002100 GO:0003677|GO:0046983
Bach7g01637 229 SMART madsneu2 16 75 IPR002100 GO:0003677|GO:0046983
Bach7g01637 229 Gene3D - 28 94 IPR036879 GO:0003677|GO:0046983
Bach7g01637 229 Pfam K-box region 98 181 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach7g01637 229 Coils Coil 102 129 - -
Bach7g01637 229 CDD MADS_MEF2_like 17 91 IPR033896 GO:0000977|GO:0045944
Bach7g01637 229 PRINTS MADS domain signature 38 53 IPR002100 GO:0003677|GO:0046983
Bach7g01637 229 PRINTS MADS domain signature 18 38 IPR002100 GO:0003677|GO:0046983
Bach7g01637 229 PRINTS MADS domain signature 53 74 IPR002100 GO:0003677|GO:0046983
Bach7g01637 229 ProSitePatterns MADS-box domain signature. 18 72 IPR002100 GO:0003677|GO:0046983
Bach7g01637 229 FunFam agamous-like MADS-box protein AGL11 28 111 - -
Bach7g01637 229 ProSiteProfiles MADS-box domain profile. 16 76 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01637 Bach-Chr7 25564551 25571181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01637 14 229 MADS-box Gene Family AT3G58780 61.702 1.21e-95 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach7g01637 K-box 9.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01637 K09264 - gmx:732595 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00064 11 466136 471991 Bach7g01637 7 25564551 25571181 BWGD
Bach7g01637 7 25564551 25571181 Bach7g01637 7 25564551 25571181 ECH