Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01636 ATGGCTTTTCCCAACAAATCCGTGTCAGTTTCTCCTGAGAGAAAGATGGGAAGGGGGAAGATTGAGATCAAAAGGATTGAGAACACCACCAATCGCCAAGTCACCTTCTGTAAGCGCAGAAATGGCCTTCTCAAAAAGGCCTATGAATTATCTGTGCTTTGTGATGCTGAGGTTGCTCTAATCGTCTTCTCTACCCGTGGACGCCTCTATGAATATGCTAATAACAGTGTCAAAGCAACTATTGAGAGGTACAAGAAGGCATGTTCAGATTCAAATAATGGTGGATCATCTTCTGAGGCTGATGCCAAGTATTACCAGCAAGAAGCTGCCAAACTGCGAATGCAAATCAACAACCTTCAGAATAACAACAGGCAAATGATGGGTGAGACTTTGGGCAATCTGTCTGTCAAGGAACTTAAAAACCTGGAGACTAGATTAGAAAAAGGAATTAGCAGAATTCGTTCCAAAAAGAAACATAGTCACTGTAATATACTCACATTTAACTGTAAATATTGTACATCGCAGGAAATTGACTTGCACAATAATAACCAGCTTCTTCGAGCAAAGATAGCTGAAAGTGAGAGAAGCCAACATAACATGAACTTGTTGCCTGGAAGCTCAAGCTATGAAGTTATGCAGTCTCATCAGCAAACATATGACTCTCGAACCTACTTCCAAGTGACTGGGTTGCAACCCAGTAATCAGTATTCGAAGCAAGACCAGATGGCCCTTCAATTAGTGTAA 744 0.414 MAFPNKSVSVSPERKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKATIERYKKACSDSNNGGSSSEADAKYYQQEAAKLRMQINNLQNNNRQMMGETLGNLSVKELKNLETRLEKGISRIRSKKKHSHCNILTFNCKYCTSQEIDLHNNNQLLRAKIAESERSQHNMNLLPGSSSYEVMQSHQQTYDSRTYFQVTGLQPSNQYSKQDQMALQLV 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01636 247 SUPERFAMILY SRF-like 17 88 IPR036879 GO:0003677|GO:0046983
Bach7g01636 247 Pfam K-box region 98 190 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach7g01636 247 CDD MADS_MEF2_like 17 86 IPR033896 GO:0000977|GO:0045944
Bach7g01636 247 PANTHER SERUM RESPONSE FACTOR HOMOLOG 16 201 - -
Bach7g01636 247 Gene3D - 28 94 IPR036879 GO:0003677|GO:0046983
Bach7g01636 247 SMART madsneu2 16 75 IPR002100 GO:0003677|GO:0046983
Bach7g01636 247 PRINTS MADS domain signature 18 38 IPR002100 GO:0003677|GO:0046983
Bach7g01636 247 PRINTS MADS domain signature 38 53 IPR002100 GO:0003677|GO:0046983
Bach7g01636 247 PRINTS MADS domain signature 53 74 IPR002100 GO:0003677|GO:0046983
Bach7g01636 247 Coils Coil 102 129 - -
Bach7g01636 247 ProSiteProfiles K-box domain profile. 102 196 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach7g01636 247 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 25 72 IPR002100 GO:0003677|GO:0046983
Bach7g01636 247 FunFam agamous-like MADS-box protein AGL11 28 111 - -
Bach7g01636 247 ProSitePatterns MADS-box domain signature. 18 72 IPR002100 GO:0003677|GO:0046983
Bach7g01636 247 ProSiteProfiles MADS-box domain profile. 16 76 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01636 Bach-Chr7 25546128 25552513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01636 14 247 MADS-box Gene Family AT3G58780 62.343 8.72e-99 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach7g01636 K-box 9.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01636 K09264 - gmx:732595 379.022