Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01607 ATGGCAAGAAAGAAAATACAGATCAAGAAGATTGAGAACATAACAGCGAGGCAGGTGACTTTCTCTAAGAGGAGGAAAGGTGTTTTCAAGAAGGCCCAGGAACTGTCAACTCTTTGTGATGCTGAGATAGCTCTCATTGTTTTCTCTTCCACTGGCAGGTTGTTCGAGTTTGCTAGTTCAAGGTATCTAGCTCAGCTCTCTCCCTCTTTTCTTCTCAATGCATTTTGA 228 0.4254 MARKKIQIKKIENITARQVTFSKRRKGVFKKAQELSTLCDAEIALIVFSSTGRLFEFASSRYLAQLSPSFLLNAF 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01607 75 CDD MADS_MEF2_like 2 60 IPR033896 GO:0000977|GO:0045944
Bach7g01607 75 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 61 - -
Bach7g01607 75 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach7g01607 75 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach7g01607 75 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach7g01607 75 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach7g01607 75 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach7g01607 75 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach7g01607 75 Gene3D - 13 70 IPR036879 GO:0003677|GO:0046983
Bach7g01607 75 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach7g01607 75 SUPERFAMILY SRF-like 1 64 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01607 Bach-Chr7 25310933 25311160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01607 1 61 MADS-box Gene Family AT4G24540 78.689 4.06e-31 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Bach7g01607 SRF-TF 3.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01607 - - thj:104799797 106.301