Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01605 ATGAGCTTCGGGAGCAGAGAGAAAGATACCACCATGTCGACATCAGCTGCAAGCAACATGAAGACCAGCAACTTGTTCTTCAACAGGGACAAGGCACTAGCCCAGTACAGTGCCGATGCTGGGATTTTGGCCGAGTTTGAGCAATCTAGTGTGTCTGGTAAATCATTCGACTATTCAAAGTCGGTTCTTTATCCTCCTAAATTGGTGTCGGAAGAGAAAATAGCTGCTTATTTGTCGAAAATTCAAAGGGGTGGTCTCATTCAGCCCTTTGGGTGTATGATTGCAATTGAAGAACCCACTTTCAGAATCATCGGCTACAGTGAGAATTGCTTTGAATTGTTGAGTTTAGACAGACAATTTGATTCCAAACAATTTAAGGGCCTAATTGGAGTTGATGCTACAACACTCTTCACTCCTTCTTCTGGGGCTTCTCTTGCAAAAGCTGCGGCTTCTAGGGAGCTTTCTTTTTTGAACCCAATTTGGGTCTATTCAAGGGCAACCCTGAAGCCATTCTATGCTATAATGCATAGAATTGATGTGGGGATTGTGATTGATTTGGAGCCTGCAAAGTCTAGTGATCGTGCATTGTCACTTGCTGGTGCTGTGCAGTCTCAGAAGCTATCTGTCAGGGCAATCTCAAGGCTGCAATCTCTTCCTGGGGGAGATATTGGTGTTTTATGTGATACTGTTGTTGAGGAAGTGCAGAAGCTTACTGGGTATGACCGGGTTATGGTTTATAAGTTCCATGATGATGATCATGGTGAAGTGGTATCTGAGATTAGAAGGTCAGATTTAGAGCCCTATTTGGGTTTGCATTATCCAGCCAGGGATATCCCTCAAGCTGCTCGCTTTTTGTTCAGACAAAATCGGGTTAGAATGATTTGTGATTGCAATGCAAATCCAGTTAAGGTCATTCAGAGTGAAGAGTTAAGGCGGCCTCTTATCTTGGTCAATTCAACCCTTCGGTCACCACATGGGTGTCACACACAATACATGGCTAACATGGGCTCCATTGCTTCTCTGGTAATGGCAATTATAGTCAATGGAAATGATACAACAAAGCTTTGGGGTTTGCTAGTCTGTCATCACACTTCATCGCGCTATGTGCCTTTTCCACTTCGCTATGCTTGTGAGTTCCTAATGCAGGCTTTTGGACTGCAACTTTACATGGAGATTCAATTGGCATCACAAATGGCAGAGAAGAAAATTCTTAGAACTCAGACCTTACTGTGTGACATGCTCCTCCGTGATGCCCCATTTGGTATTGTGACACAATCTCCCAGTATCATGGATCTTGTTAAGTGTGATGGGGCTGCAATGTATTATGATGGAAAGTGTTGGTTGTTAGGCATAACCCCAACTGAATCACAGGTGAAAAACATTGCTGAGTGGTTACTTAATTGTCATGGGGATTCAACAGGTTTGAGCACAGATAGTCTGGCAGATGCCGGTTATCCAGGTGCTGCTTCACTGGGGGAAGCAGTTTGTGGCATGGCCACTGCAAGGATTAATTCAAGAGATTTCTTGTTTTGGTTCAGGTCTCACACTGCTAAGGAAGTTAAATGGGGAGGAGCAAAGCACCATCCAGAGGACAAGGATGATGGTGGAAAAATGAACCCAAGATCATCATTTAACGTTTTTCTTGAAGTAGTCAAAAACAAAAGTTTGCCTTGGGAAGTGTCAGAAATCAATGCTATTCACTCATTACAGCTTATAATCAGAGACTCGTTCCAAGACGTAGAGAACTCAGGTCCTAAGACTCTGAGTTATGTACAGCAGCAGAGTGACACTGCAACGAGTGGGGTGGATGAACTCAGCTCAGTGGCATTTGAAATGGTTAGATTAATTGAAACAGCGACAGTTCCAATTTTTGGGGTTGATTCAGCTGGTCTGATCAATGGATGGAATCCGAAAATTGCTGAATTGGTGGGGCTTCCGGCAAGTGAAGCTATGGGAAAATCCCTAGTAAATGAAGTAATACACGAGGACACACGAGAAGAAGTCGAAAACATTTTAAGCAGAGCCTTGCAAGGTCAGGAGGACAAAAATATTGAGTTGAAATTAAAGCACTTTGGGCTTCATCAAGAAAAGTCAATTGTGTACATTATAGCCAATGCCTGCACAAGTAGGGATTACACAAACGCTGTTGTTGGAGTGTGCTTTGTGGGTCAAGATATCACTGACGAGAAAGTTGTTCTGGATAAGTTCATCAGGTTGGAAGGTGATTACAAAGCTATCATACAGAGTGTCAGTCCACTGATTCCGCCCATTTTTGCTTCTGATGAGAATGCTTGCTGTTCTGAATGGAATGCAGCCATGGAAAAATTAACTGGTTGGAAGAGAGATGAAGTTATAGGAAAAATGCTTCCTGGGGAAATCTTTGGAAATTTATGTCAGTTGAAAGGTCAAAATACACTGACTAATTATAAGATTTTATTGTATCGAGGAATTGGTGGTCAAGATTCTGAGAAGTTCCCTTTTGGATTTTTTAATAGAAAGGGAGAATTCGTAGATGTTTTCTTAACAGCAAACAAGAGGATTGATGCTGTTGGAAATATAGTTGGCTGTTTCTGCTTCCTGCAGATTGTACCACAAGAACAGTATCAGCTCTCAGAAGTACACAAGTCGAAAAGCAGGAACCGCCCTTCTGAATTTAAGCAGTTGGCTTATATATTACAAGAAATGAAGAATCCTTTGAATGGCATACGCTTCACACACAAACTTCTGGAAAACACCGCTGTCTCAGAAAGCCAGAAACAATTCCTTGACACTAGTGATGCATGTGAAAGACAGATTATGGCAATTATTGAGGATTTAGATTTAAGAAGTCTTGAAGAAGGCACTGTGCAGCTAAACATGGAAGAGTTCGTTCTTGGAAATATTTTAGATGCCATTGTTAGTCAAGTCATGATCTTGATAAGAGGAAAAAACCTGCAGCTGTTTCACGAAATTCCGGATGAGATCAAAACACTTGAACTGTACGGTGATCAAATTAGGCTTCAGGTGGTCTTATCTGACTTTTTGCTTACTGTGGTCAGCCATACACCATCTCCTAACGGCTGGGTAGAAATCAAAATTTCACCTGGGCTGAAGATTATACAGGATGGCAATGAGCTTATACACCTGCAGTTCAGAATGACTCATGCTGGTCAAGGTTTGCCTTCTACTGTTCTTCAGGATATGTTTGAAGGAGGAAACCAATGGAATACACAGGAAGGTCTAGGCCTAAACATCTCCAGGAAAATTCTCAGTAAGATGAACGGTCATGTCCACTATGTAAGAGAACATAACAAGTGCTACTTCCTCATTGATCTTGAACTTAGAACAAGAAAAGAAAGGCCGAGGGTTCTGCAAGAAGATACAAGCATGACGATTAAGCTTTCTTCTCCAGATGCTCCTATTCGTGCAAGGGGTCAAGAGGGTCATTCATAG 3432 0.421 MSFGSREKDTTMSTSAASNMKTSNLFFNRDKALAQYSADAGILAEFEQSSVSGKSFDYSKSVLYPPKLVSEEKIAAYLSKIQRGGLIQPFGCMIAIEEPTFRIIGYSENCFELLSLDRQFDSKQFKGLIGVDATTLFTPSSGASLAKAAASRELSFLNPIWVYSRATLKPFYAIMHRIDVGIVIDLEPAKSSDRALSLAGAVQSQKLSVRAISRLQSLPGGDIGVLCDTVVEEVQKLTGYDRVMVYKFHDDDHGEVVSEIRRSDLEPYLGLHYPARDIPQAARFLFRQNRVRMICDCNANPVKVIQSEELRRPLILVNSTLRSPHGCHTQYMANMGSIASLVMAIIVNGNDTTKLWGLLVCHHTSSRYVPFPLRYACEFLMQAFGLQLYMEIQLASQMAEKKILRTQTLLCDMLLRDAPFGIVTQSPSIMDLVKCDGAAMYYDGKCWLLGITPTESQVKNIAEWLLNCHGDSTGLSTDSLADAGYPGAASLGEAVCGMATARINSRDFLFWFRSHTAKEVKWGGAKHHPEDKDDGGKMNPRSSFNVFLEVVKNKSLPWEVSEINAIHSLQLIIRDSFQDVENSGPKTLSYVQQQSDTATSGVDELSSVAFEMVRLIETATVPIFGVDSAGLINGWNPKIAELVGLPASEAMGKSLVNEVIHEDTREEVENILSRALQGQEDKNIELKLKHFGLHQEKSIVYIIANACTSRDYTNAVVGVCFVGQDITDEKVVLDKFIRLEGDYKAIIQSVSPLIPPIFASDENACCSEWNAAMEKLTGWKRDEVIGKMLPGEIFGNLCQLKGQNTLTNYKILLYRGIGGQDSEKFPFGFFNRKGEFVDVFLTANKRIDAVGNIVGCFCFLQIVPQEQYQLSEVHKSKSRNRPSEFKQLAYILQEMKNPLNGIRFTHKLLENTAVSESQKQFLDTSDACERQIMAIIEDLDLRSLEEGTVQLNMEEFVLGNILDAIVSQVMILIRGKNLQLFHEIPDEIKTLELYGDQIRLQVVLSDFLLTVVSHTPSPNGWVEIKISPGLKIIQDGNELIHLQFRMTHAGQGLPSTVLQDMFEGGNQWNTQEGLGLNISRKILSKMNGHVHYVREHNKCYFLIDLELRTRKERPRVLQEDTSMTIKLSSPDAPIRARGQEGHS 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01605 1143 CDD PAS 619 726 IPR000014 -
Bach7g01605 1143 FunFam Phytochrome 604 736 - -
Bach7g01605 1143 CDD HATPase_Phy-like 994 1107 IPR044767 -
Bach7g01605 1143 NCBIfam PAS domain S-box protein 615 730 IPR000014 -
Bach7g01605 1143 Gene3D - 925 1101 IPR036890 -
Bach7g01605 1143 SUPERFAMILY PYP-like sensor domain (PAS domain) 614 722 IPR035965 -
Bach7g01605 1143 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 948 1107 IPR036890 -
Bach7g01605 1143 ProSiteProfiles PAS repeat profile. 742 794 IPR000014 -
Bach7g01605 1143 PANTHER OS08G0260000 PROTEIN 73 945 - -
Bach7g01605 1143 SMART HisKA_10 883 947 IPR003661 GO:0000155|GO:0007165
Bach7g01605 1143 ProSiteProfiles Histidine kinase domain profile. 890 1109 IPR005467 -
Bach7g01605 1143 FunFam Phytochrome 397 527 - -
Bach7g01605 1143 Gene3D PAS domain 610 730 - -
Bach7g01605 1143 ProSiteProfiles Phytochrome chromophore attachment site domain profile. 222 382 IPR016132 -
Bach7g01605 1143 Pfam PAS fold 76 189 IPR013654 GO:0006355
Bach7g01605 1143 Pfam His Kinase A (phospho-acceptor) domain 887 947 IPR003661 GO:0000155|GO:0007165
Bach7g01605 1143 CDD HisKA 888 943 IPR003661 GO:0000155|GO:0007165
Bach7g01605 1143 Gene3D PAS domain 80 325 - -
Bach7g01605 1143 FunFam Phytochrome 946 1113 - -
Bach7g01605 1143 ProSiteProfiles PAS repeat profile. 608 679 IPR000014 -
Bach7g01605 1143 SMART gaf_1 222 402 IPR003018 GO:0005515
Bach7g01605 1143 Gene3D - 397 570 IPR043150 -
Bach7g01605 1143 PIRSF Phytochrome_conventional 5 1116 IPR012129 GO:0006355|GO:0009585|GO:0009881|GO:0017006|GO:0042803
Bach7g01605 1143 SUPERFAMILY GAF domain-like 400 579 - -
Bach7g01605 1143 CDD PAS 753 861 IPR000014 -
Bach7g01605 1143 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 995 1106 IPR003594 -
Bach7g01605 1143 ProSiteProfiles PAC domain profile. 682 738 IPR000700 -
Bach7g01605 1143 SMART HKATPase_4 995 1109 IPR003594 -
Bach7g01605 1143 PRINTS Phytochrome signature 322 343 IPR001294 GO:0006355|GO:0009584
Bach7g01605 1143 PRINTS Phytochrome signature 422 442 IPR001294 GO:0006355|GO:0009584
Bach7g01605 1143 PRINTS Phytochrome signature 724 744 IPR001294 GO:0006355|GO:0009584
Bach7g01605 1143 PRINTS Phytochrome signature 237 256 IPR001294 GO:0006355|GO:0009584
Bach7g01605 1143 PRINTS Phytochrome signature 611 627 IPR001294 GO:0006355|GO:0009584
Bach7g01605 1143 PRINTS Phytochrome signature 137 159 IPR001294 GO:0006355|GO:0009584
Bach7g01605 1143 PRINTS Phytochrome signature 507 526 IPR001294 GO:0006355|GO:0009584
Bach7g01605 1143 PRINTS Phytochrome signature 540 558 IPR001294 GO:0006355|GO:0009584
Bach7g01605 1143 PRINTS Phytochrome signature 630 645 IPR001294 GO:0006355|GO:0009584
Bach7g01605 1143 PRINTS Phytochrome signature 704 721 IPR001294 GO:0006355|GO:0009584
Bach7g01605 1143 SUPERFAMILY PYP-like sensor domain (PAS domain) 81 191 IPR035965 -
Bach7g01605 1143 Pfam GAF domain 222 392 IPR003018 GO:0005515
Bach7g01605 1143 SUPERFAMILY GAF domain-like 202 388 - -
Bach7g01605 1143 Gene3D - 203 553 IPR029016 -
Bach7g01605 1143 SUPERFAMILY PYP-like sensor domain (PAS domain) 756 858 IPR035965 -
Bach7g01605 1143 SMART pas_2 741 810 IPR000014 -
Bach7g01605 1143 SMART pas_2 610 677 IPR000014 -
Bach7g01605 1143 Pfam PAS fold 742 861 IPR013767 GO:0006355
Bach7g01605 1143 Pfam PAS fold 611 726 IPR013767 GO:0006355
Bach7g01605 1143 FunFam Phytochrome 755 863 - -
Bach7g01605 1143 Gene3D PAS domain 755 869 - -
Bach7g01605 1143 Pfam Phytochrome region 405 578 IPR013515 GO:0006355|GO:0009584
Bach7g01605 1143 ProSitePatterns Phytochrome chromophore attachment site signature. 322 331 IPR013516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01605 Bach-Chr7 25289178 25294046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01605 13 1109 Histidine Kinase Gene Family AT4G18130 64.170 0.0 1486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01605 K12123 - gmx:100808192 1841.62