Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01604 ATGAAGCTGATGGGTGATGCTATGAAGCAGTCTTTTGACAGTGCATCTTCAGGTCCTACCAAGATTCCATCTGTAAATATGTCTAAGGAAGTGGGACGTGGTGCATGGGAGGTTTTATCTGGTTCAGATGCATACCATGCGTCATCTGATGCTACCCTTTTTTCCAGCTCATTACCTGTTTTGCCACATGAAAAGTTGAACTTGAATGGCACTGAAAATGGTTATGAATCTGTTGATGACATCTCATCTGGCTTTCAAAAGATTCATCAAGACATTGAGGGCAATGATTCACTTGAAGATCTTGATACCCATGCAATTGGACCCTTGCTTCCTGATGATGAGGAGGAGCTTTTAGCTGGCATAACAGATGATTTTGACCTAAGTGGCTTGCCTGGTTCCCTGGAGGACTTGGAAGAGTATGATCTTTTTGGTAGCGGTGGAGGTATGGAACTGGAAACTGATCCACAGGAAAGTCTCAGTGTGGGTATGTCAAAATTAAGTTTCTCTGATAGTTCTATTGGCAATGGTGTGGCCCATTATTCTTTTCCTAATGGTGTGGGAACTGTTGCCGGAGAACATCCATATGGGGAACATCCTTCTCGAACATTATTTGTTCGAAATATTAACAGTAATGTGGAGGATTCTGAACTTAGAGCCCTTTTTGAGCAATATGGTGATATTCGAACTCTCTATACTGCATGTAAACATCGCGGATTTGTAATGATATCCTACTATGATATCCGTGCTGCTCGAACAGCTATGCGTGCATTACAAAACAAACCACTGCGGCGCAGGAAACTTGACATTCATTTCTCAATACCAAAGGATAATCCATCAGACAAGGATATAAACCAAGGAACCTTGGTGGTGTTTAATTTGGATCCATCTGTTTCAAATGAAGATCTTCGTCAAATATTTATGGCGTATGGTGAGGTCAAAGAGATAAGGGAAACCCCACACAAGAGGCATCATAAGTTCATAGAATATTATGATGTTAGAGCTGCAGAAGCAGCACTAAAGTCATTGAACAGGAGTGACATAGCTGGTAAACGCATAAAGCTAGAACCAAGTCGCCCTGGTGGAGCTCGTCGAAATTTAATGCTGCAAATAAATCAAGAGCTTGAGACAGATGAATCTTGGAGTTTCCGGCTGCAAGTGGCTTCGCCACTTACCAACTCCCCACCAGGTAACTGGCTGCATCTTAACAGTCCTGTTGAACATAATCCAATGCAAACAATGAGTAAATCCCCTGGATCAAGAATAATGAGCCCAACAACAGGCAACCACTCACCTGGGTTGGCTTCAATTTTGCAACCTCAGGTATCAAATGCTGTCAAGGGTGCAACCATTGGCAAGGACATAGGAAGGAGTATTCATGGAGAGCACTTATATGCTACCAACAGTTCATCACACGGAGCTGCATTTCAGTCACATTCATTGCCGGAGCCAAATTTCACCCAATATCAGGGAGCATTACCCTCTTTTGGTCCATCAACCTCCAACGGATCCTCAATTGAGACCTTGTCTGGCCCACAATTTCTATGGGGAAGTCCAAGCCTATACTCAGAGCGCACCAAAGCTTCAGCTTGGACAAGGCCATCTGTGGGGCATCCATTTACATCAAATGGGAAGACCCATGCCTTCCCATACGCAGGTCAGAATAGTTCCTTCATTGGTTTATCCCAGCATCACAACCATCGGCATGTTGGCTCTGCACCATCTGGTGCTCCTTTAGAGAGGCATTTTGGTTTCCTTCCAGGGTCACCAGATACGTCTTTCATGAATCATGTTGTTTATGAAGGCATAAGTTTAGGACACAATGGGAGAAATATGTCAGAAAATGGCTCTTCAAACTTCAGAATGAGATCTTCACCAAGGCTTAGCCCAGTGTTTTTGGGTAATTGTCCTTACCCAGGACTGCCACCTACAACATTTGAGGGTTTGAATGATCGTGGGCGGATCAGACGGATAGAGAACAATGGGAGCCAAGTTGATAGCAAGAAACAATTTCAGCTTGACTTGGATAAGATTATTAGTGGTGAAGATAAAAGGACAACTTTAATGATAAAGAACATCCCAAATAAATACACTTCAAAAATGTTGCTAGCTGCCATTGATGAATATCACAGGGGTACCTATGATTTTTTCTATCTGCCAATTGATTTTAAGAATAAATGCAACGTGGGCTATGCATTTATCAACATGCTCTCACCATCACTCATAATTCCATTCTATGAGTCATTTAATGGAAAGAAGTGGGAGAAGTTTAATAGTGAGAAAGTTGCATCTCTGGCATATGCTCGAATTCAAGGAAAGGTTGCCCTTGTTAGCCACTTCCAAAATTCAAGTTTGATGAATGAAGATAAGCGCTGCCGCCCTATTCTTTTCCATTCAGAGGGTCCTGAAGCTGGTGATCAGATCATACAAGAGCATCTTCTCTCCAGCAGTTTGAATATTCATATCCTTAGGCCAAGTGAGTCACATTCAAGTGATTTTCCTGGAAGCCCTCCGAAGGATGGCCCTCCTGAGAACTTGGAAATAAGTTAA 2547 0.4268 MKLMGDAMKQSFDSASSGPTKIPSVNMSKEVGRGAWEVLSGSDAYHASSDATLFSSSLPVLPHEKLNLNGTENGYESVDDISSGFQKIHQDIEGNDSLEDLDTHAIGPLLPDDEEELLAGITDDFDLSGLPGSLEDLEEYDLFGSGGGMELETDPQESLSVGMSKLSFSDSSIGNGVAHYSFPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQIFMAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQINQELETDESWSFRLQVASPLTNSPPGNWLHLNSPVEHNPMQTMSKSPGSRIMSPTTGNHSPGLASILQPQVSNAVKGATIGKDIGRSIHGEHLYATNSSSHGAAFQSHSLPEPNFTQYQGALPSFGPSTSNGSSIETLSGPQFLWGSPSLYSERTKASAWTRPSVGHPFTSNGKTHAFPYAGQNSSFIGLSQHHNHRHVGSAPSGAPLERHFGFLPGSPDTSFMNHVVYEGISLGHNGRNMSENGSSNFRMRSSPRLSPVFLGNCPYPGLPPTTFEGLNDRGRIRRIENNGSQVDSKKQFQLDLDKIISGEDKRTTLMIKNIPNKYTSKMLLAAIDEYHRGTYDFFYLPIDFKNKCNVGYAFINMLSPSLIIPFYESFNGKKWEKFNSEKVASLAYARIQGKVALVSHFQNSSLMNEDKRCRPILFHSEGPEAGDQIIQEHLLSSSLNIHILRPSESHSSDFPGSPPKDGPPENLEIS 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01604 848 Gene3D - 285 382 IPR012677 -
Bach7g01604 848 Pfam RNA recognition motif 2 684 780 IPR007201 -
Bach7g01604 848 CDD RRM2_MEI2_like 285 355 - -
Bach7g01604 848 MobiDBLite consensus disorder prediction 826 848 - -
Bach7g01604 848 SMART rrm1_1 202 270 IPR000504 GO:0003723
Bach7g01604 848 SMART rrm1_1 686 762 IPR000504 GO:0003723
Bach7g01604 848 SMART rrm1_1 287 355 IPR000504 GO:0003723
Bach7g01604 848 MobiDBLite consensus disorder prediction 10 24 - -
Bach7g01604 848 FunFam MEI2-like protein 5 isoform 2 190 284 - -
Bach7g01604 848 SUPERFAMILY RNA-binding domain, RBD 198 361 IPR035979 GO:0003676
Bach7g01604 848 Gene3D - 190 284 IPR012677 -
Bach7g01604 848 CDD RRM1_MEI2_like 200 276 IPR034453 -
Bach7g01604 848 PANTHER RNA RECOGNITION MOTIF-CONTAINING 43 799 - -
Bach7g01604 848 MobiDBLite consensus disorder prediction 1 26 - -
Bach7g01604 848 FunFam Protein MEI2-like 1 285 380 - -
Bach7g01604 848 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 286 359 IPR000504 GO:0003723
Bach7g01604 848 SUPERFAMILY RNA-binding domain, RBD 686 770 IPR035979 GO:0003676
Bach7g01604 848 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 201 274 IPR000504 GO:0003723
Bach7g01604 848 CDD RRM3_MEI2_like 687 772 IPR034454 -
Bach7g01604 848 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 288 353 IPR000504 GO:0003723
Bach7g01604 848 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 203 267 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01604 Bach-Chr7 25283647 25287526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01604 196 394 Eukaryotic Initiation Factors Gene Family AT1G71770 25.778 3.02e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01604 - - gmx:100800877 1394.41