Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01530 ATGGCTAAACCGAAGGCTCCAAGACGAACCCTAGAGTCATATACAGTCAAACACATAAACAAAACCGTTAAAGCCGGCGACTGCGTGCTCATGCGGCCGTCCGATCCTTCGAAGTCATCGTACGTGGCAAGGATCGAGCGGATCGAAGCGGACTCGCGAGGTGCTAACGTGAAGGTTCACGTCCGTTGGTATTACCGGCCGGAGGAATCAATCGGCGGCCGTCGCCAGTTTCATGGTTCTAAGGAGGTTTTTCTATCTGATCACTATGACGCTCAGAGCGCCGATACGATCGAAGGAAAATGTACCGTTCACAGTTTTAAGAGCTACACGAAGCTCGATGCTGTTGGAAATGACGATTTCTTCTGCCGGTTCGAGTACAATTCGGCCACTGGGGCCTTCAATCCTGATAGAGTCGCCGTGTATTGTAAATGTGAGATGCCCTACAACCCTGATGATCTAATGGTCCAGTGTGAGGGTTGCAGTGACTGGTTTCATCCTACTTGTATAGACATGACTGTTGAGGAAGCTAGAAGACTTGATCACTTCTTTTGTGAAAATTGTTCTGCGGATGGTCAGAAGAAGTTGCAGAATTCTCATGCTGCCTCAAGACACACAGATATGAAGGTGGATACAAAACGTCGTCGAAGATGA 651 0.4854 MAKPKAPRRTLESYTVKHINKTVKAGDCVLMRPSDPSKSSYVARIERIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKEVFLSDHYDAQSADTIEGKCTVHSFKSYTKLDAVGNDDFFCRFEYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWFHPTCIDMTVEEARRLDHFFCENCSADGQKKLQNSHAASRHTDMKVDTKRRRR 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01530 216 ProSitePatterns Zinc finger PHD-type signature. 142 187 IPR019786 -
Bach7g01530 216 SUPERFAMILY FYVE/PHD zinc finger 131 193 IPR011011 -
Bach7g01530 216 FunFam Chromatin remodeling protein EBS 1 133 - -
Bach7g01530 216 FunFam Bromo-adjacent homology (BAH) domain-containing protein 134 204 - -
Bach7g01530 216 SMART BAH_4 21 137 IPR001025 GO:0003682
Bach7g01530 216 ProSiteProfiles BAH domain profile. 21 137 IPR001025 GO:0003682
Bach7g01530 216 Gene3D - 2 133 IPR043151 -
Bach7g01530 216 SMART PHD_3 141 188 IPR001965 -
Bach7g01530 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 205 IPR013083 -
Bach7g01530 216 Pfam PHD-finger 141 189 IPR019787 -
Bach7g01530 216 ProSiteProfiles Zinc finger PHD-type profile. 139 190 IPR019787 -
Bach7g01530 216 MobiDBLite consensus disorder prediction 195 216 - -
Bach7g01530 216 PANTHER OS08G0421900 PROTEIN 5 208 - -
Bach7g01530 216 Pfam BAH domain 22 136 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01530 Bach-Chr7 24735923 24738438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01530 24 139 Core DNA Replication Machinery Family AT4G14700 26.154 5.47e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach7g01530 BAH 1.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01530 K25868 - qsa:O6P43_001862 431.795