Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01529 ATGGGAAAGAAGAATAAATTGAAGGAAAGTGGCAGCAAAGGAGCTACAAAAGAACACTGCTCCTCAACTGTTTTTGTCTCAAACCTGCCATATTCCTTCACCAATTCTCAGCTCGAGGAGACGTTCAGTGATGTAGGACCAATCAGGCGTTGCTTCATGGTCACACAAAAGGGGTCAGTCCAGCATCGTGGTTTTGGCTATGTTCAATTTGCTGTTGAGGAAGATGCTAACCGTGCTATCGAGTTGAAGGACGGTTCATCTGTTGGAGGTCGGAAAATTGTAGTGAAGCATGCTATGCCCCGCCCATCTCGTGAAGCACGACAATCAAAGTCAAATCAAGTGGTCAAGACAGATGATATTACACAACCAAAAGATGATGATAATGATGGTGGTTTTTCTGGAGCAGAGAAGCCTTCTTCAGTTCTGAAGGAAAAAGAATTTCCAGTTTCAAACAAAGAAAAAATCTCAAGGAAGTCCGTGGACATGAGAAAAGGCTCTCTTTGTGGTGATATACCAGATGAGGGGGGTTGTTCTGAAAAGCAGAGGGTTGCTAGAACTGTTATATTTGGTGGTCTTGTTAATTCTGATATGGCTGAAAATGTTCATTGCCAAGCCAGGGAGATTGGCACTGTGTGTTCTGTAAAGTACCCTCTTCCAAGGGAAGAGCTTCAGCAACATGGTCTTGTACAAGATGGCTGTAAAATGGATGCTTCTGCTGTACTTTACACAAGTGTGAAAGCAGCACGAGCTTCTATTGCAATATTACACAGAAAGGAGATAGGAGGGGGAACTGTTTGGGCACGTCAACTGGGTGGAGAGGGCTCCAAGACTCAGAAATGGAAACTTATTGTCAGAAATCTTCCTTTCAAGGCCACAGAAAATGAAATAAAAGATAAATTTTCATCTGCAGGGTTTGTGTGGGATGTATTTATTCCACACAAGTCAGATACAGGTCTGTCTAAGGGTTTTGGATTTGTGAAGTTCACATGCAAGCAAGATGCTGAAAATGCAATTCAGAAACTCAATGGATCATTGTTTCGCAAACGGCTTGTAGCTGTTGACTGGGCTGCTCCCAAGAAGATATATAGTAGTGATACAAATGTTCTCGCTTCAGAAAATGGACAACAAAAGGTGAGAGATGACTATGGTAGTAGCTCGGGGGATGATTTAGAGGATGATGTTGACCATACTGGCAAACAATCCAATCATGGAGATGATAGTGACCTAGATGACTCCAATAGTGTAAAGGAAGATGTTTCTTCTGATGTTAATTTTGATAAGGAAGCAGACATTGCAAGAAAGGTTCTTGAGAACTTGATCACATCCTCTACTAAGGGAACATCATCAAATGACGAATATGTGTTGTCCGAGAAAAGCAAGGAGCCCAAACCCAATGAAATTGTTAACGATACAGATAATAAATCATCTAATGAGTCTGAAAAAGTTTCAGCTGTTTCTAAGCCTGAGAGTTCCGGTGGAACCAAAGTATCAAATCCTAAGGAAACAGACGAAGGGGATTTGCAGAGAACAGTTTTCATAAGTAATCTTCCCTTTGATTGCGATAATGAAGAAGTGAAACAACGTTTTTCTGGATTTGGGGAAGTAGAATACTTTGTTCCAGTCCTTCATCACGTGACTAAGCGACCAAAAGGGACTGGTTTTCTTAGGTTTAAAACTGTAGATGCTGCTACTGCTGCGGTTTCAACAGCCAGTGCTGCTTCTGGCTTGGGTGTTTTTCTGAAGGGCAGGCCATTAAAAGTTTTGAAGGCTTTGGATAAGAAATCAGCTCATGACAAGGAACTTGAAAAGGCTAAAAATGAAGTTCATGACCACCGCAATCTTTATCTTGCAAAGGAGGGACTCATTCTTGAGGGAACTCCAGCTGCCGAAGGGGTTTCAGCCGCTGATATGTCAAAACGCCAGGAGTTGGAAAGGAAAAAGAAGATAAAGCTTCAATCACCAAATTTTCATGTTTCAAGAACCAGACTTGTTATCTACAATTTACCGAAGTCCATGACTGAGAAAGAACTCAAGAAACTTTGCATTGATGCAGTTACCTCTAGAGCAACCAAGCAAAAACCTTTAATTCAACAGATAAAGTTCTTGAAGGATGTAAAGAAAGGAAAGGATGCGACCGGACACCATTCACGTGGAGTTGCCTTTGTCGAATTCTCAGAGCATCAGCATGCTCTTGTGTCTCTTAGAGTTCTCAATAATAATCCTGAAACTTTTGGTCCCGAACATCGACCAATCGTGGAGTTTGCTCTTGACAACGTTCAAACACTAAAGCTTCGGAAAGCTAAGCTGCAAAAGCAAGCTAGTCATGATGACAAGATTGTCGAGGAAAATGAACCCCACAAATCAGATGTCCATCCACACAAGAAGGACGGAAAACGGAAATCTCGAGATCTCAACAATTCAGTGAAGGACTCTGTCGCCACCACAGAAGATGAAGAAGAAAGAAGGTTACCAAATGGAAATACGCGAGAAGGACACAGATCCAAAAGACATAAAGGCGACCATACAAGTAGAAAGGATGAAGGATTACCACGTAAAGATAATTCAGAAGGCTTGCCCAGGAAACGAAAGAATGACCAAAATGGCAAGAATCATGGTGGTAAGACAGCGGTTCAAGGCCAAACCAATGGCATTAACGCCAGTAAAACACAATCTGGTAAAAAAGCAGATATTGGATTGAAAAAGAGGAAGATGCAGAACCAAACAGAGCAAGAAGAGGAAAATTTTTCTAAGAAACGCTCTAAGAAGAATAAGGAGCCAGTGGGGAAAGATGTAGTTGATAAGCTCGACATGCTTATACAGCAATATAAATCCAAGTTTTCCCAGCAAAGCTTGCATGGAAATGATGGTGAGAAAAAACCTTCCAAAAATATCAGAAAATGGTTTGAATCATAG 2913 0.414 MGKKNKLKESGSKGATKEHCSSTVFVSNLPYSFTNSQLEETFSDVGPIRRCFMVTQKGSVQHRGFGYVQFAVEEDANRAIELKDGSSVGGRKIVVKHAMPRPSREARQSKSNQVVKTDDITQPKDDDNDGGFSGAEKPSSVLKEKEFPVSNKEKISRKSVDMRKGSLCGDIPDEGGCSEKQRVARTVIFGGLVNSDMAENVHCQAREIGTVCSVKYPLPREELQQHGLVQDGCKMDASAVLYTSVKAARASIAILHRKEIGGGTVWARQLGGEGSKTQKWKLIVRNLPFKATENEIKDKFSSAGFVWDVFIPHKSDTGLSKGFGFVKFTCKQDAENAIQKLNGSLFRKRLVAVDWAAPKKIYSSDTNVLASENGQQKVRDDYGSSSGDDLEDDVDHTGKQSNHGDDSDLDDSNSVKEDVSSDVNFDKEADIARKVLENLITSSTKGTSSNDEYVLSEKSKEPKPNEIVNDTDNKSSNESEKVSAVSKPESSGGTKVSNPKETDEGDLQRTVFISNLPFDCDNEEVKQRFSGFGEVEYFVPVLHHVTKRPKGTGFLRFKTVDAATAAVSTASAASGLGVFLKGRPLKVLKALDKKSAHDKELEKAKNEVHDHRNLYLAKEGLILEGTPAAEGVSAADMSKRQELERKKKIKLQSPNFHVSRTRLVIYNLPKSMTEKELKKLCIDAVTSRATKQKPLIQQIKFLKDVKKGKDATGHHSRGVAFVEFSEHQHALVSLRVLNNNPETFGPEHRPIVEFALDNVQTLKLRKAKLQKQASHDDKIVEENEPHKSDVHPHKKDGKRKSRDLNNSVKDSVATTEDEEERRLPNGNTREGHRSKRHKGDHTSRKDEGLPRKDNSEGLPRKRKNDQNGKNHGGKTAVQGQTNGINASKTQSGKKADIGLKKRKMQNQTEQEEENFSKKRSKKNKEPVGKDVVDKLDMLIQQYKSKFSQQSLHGNDGEKKPSKNIRKWFES 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01529 970 Gene3D - 496 600 IPR012677 -
Bach7g01529 970 MobiDBLite consensus disorder prediction 454 477 - -
Bach7g01529 970 Coils Coil 587 614 - -
Bach7g01529 970 Gene3D - 660 755 IPR012677 -
Bach7g01529 970 MobiDBLite consensus disorder prediction 870 892 - -
Bach7g01529 970 MobiDBLite consensus disorder prediction 443 507 - -
Bach7g01529 970 MobiDBLite consensus disorder prediction 944 970 - -
Bach7g01529 970 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 661 769 IPR000504 GO:0003723
Bach7g01529 970 FunFam - 2 133 - -
Bach7g01529 970 FunFam RNA-binding motif protein 28 660 755 - -
Bach7g01529 970 MobiDBLite consensus disorder prediction 382 421 - -
Bach7g01529 970 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 22 100 IPR000504 GO:0003723
Bach7g01529 970 MobiDBLite consensus disorder prediction 139 158 - -
Bach7g01529 970 MobiDBLite consensus disorder prediction 97 158 - -
Bach7g01529 970 PANTHER RNA-BINDING MOTIF PROTEIN 14B 19 970 - -
Bach7g01529 970 SUPERFAMILY RNA-binding domain, RBD 22 266 IPR035979 GO:0003676
Bach7g01529 970 CDD RRM2_RBM28_like 281 356 - -
Bach7g01529 970 MobiDBLite consensus disorder prediction 372 421 - -
Bach7g01529 970 MobiDBLite consensus disorder prediction 767 932 - -
Bach7g01529 970 Gene3D - 267 400 IPR012677 -
Bach7g01529 970 MobiDBLite consensus disorder prediction 955 970 - -
Bach7g01529 970 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 280 358 IPR000504 GO:0003723
Bach7g01529 970 MobiDBLite consensus disorder prediction 478 498 - -
Bach7g01529 970 Coils Coil 752 772 - -
Bach7g01529 970 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 511 569 IPR000504 GO:0003723
Bach7g01529 970 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 282 349 IPR000504 GO:0003723
Bach7g01529 970 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 24 93 IPR000504 GO:0003723
Bach7g01529 970 CDD RRM1_RBM28_like 23 101 - -
Bach7g01529 970 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 509 592 IPR000504 GO:0003723
Bach7g01529 970 MobiDBLite consensus disorder prediction 799 830 - -
Bach7g01529 970 MobiDBLite consensus disorder prediction 840 869 - -
Bach7g01529 970 SUPERFAMILY RNA-binding domain, RBD 276 385 IPR035979 GO:0003676
Bach7g01529 970 CDD RRM4_RBM28_like 661 758 - -
Bach7g01529 970 Gene3D - 2 114 IPR012677 -
Bach7g01529 970 SMART rrm1_1 23 96 IPR000504 GO:0003723
Bach7g01529 970 SMART rrm1_1 510 588 IPR000504 GO:0003723
Bach7g01529 970 SMART rrm1_1 281 354 IPR000504 GO:0003723
Bach7g01529 970 SMART rrm1_1 662 753 IPR000504 GO:0003723
Bach7g01529 970 FunFam Putative RNA binding ribonucleoprotein 437 606 - -
Bach7g01529 970 MobiDBLite consensus disorder prediction 894 932 - -
Bach7g01529 970 Coils Coil 901 921 - -
Bach7g01529 970 MobiDBLite consensus disorder prediction 769 791 - -
Bach7g01529 970 SUPERFAMILY RNA-binding domain, RBD 509 739 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01529 Bach-Chr7 24728057 24734697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01529 284 359 Eukaryotic Initiation Factors Gene Family AT3G11400 38.158 3.42e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01529 K14573 - gmx:100794821 1295.41