Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach7g01527 GGTACCGCTTACGTTTTCCAAATTGGGGTTCTCTTGAAGCCCTCTTTGTCACAATTTGCATATCAGATTCGTGTGCTCGAGCTGAGTTATTCTGTAGTCAATCATGGAGCCAGCAGTTGATATATTACCGACTAAGCGCCTCAATCCAAGCGGATTATATCCCGAGGGAAACAAAAGACTAAAATTATCAAGTGATGGCTTGTCATACTCTGCACATGAGTATGGTAAATCTGAGCTGAAGGAACCTAAGAATTCTTCAAATGTTGTGGATTACTCTGATCCATTAGCTATCCCTCACTTGATGAGCCGTTTAAACTATGGAAAATTTGGAAGTGTCACAAAGGAAATGCAGGACATTCTGGCCCGAAGAATGCAAGCGCTGAGCCCATACTTTGCAAAATATCCAAGGCTCTTAAATATTTTGGTAGAAGCGGGAGTTAATCAAAAGGAAGAACCTGATAATGCAGAAAATCAACATGCTATTGGTTTGGCACGTGAAAATGTCATAAATTTGGAGGAGGATTCTGTTGCAAATGATGTTCCAGCAGCATCATTGCCTATTGTAATTATTGATTCAGATGAGGAAGACGATGGAAATCAGAAACATGTGCTTCCATTTCAAGAAGTTACATTGACAAAGACTGTGGAACAGTTTCCTGGGATGGCCATAGCTGAGTACCATCATCCAATTGCATACCATGCAGAAAGTAAAGCCCGAAAATTCGAAACAAGTCTGGCCACTGAAGACAAAGCTAGCCGAGATAGAGGTGTTTATGTTGGTGTGGAAGAGAATCAACTTGCCAATGCCATAGATGATGGCCTAGATGATATCTGGAGGGAGATGTCAATGTCATTAGAATGTTCCAAAGATGTTGCTATGGATCCTCTACCTGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAGAAAAGAGGAGTGGAGGACAAACCTGGGGGGGACTGTGATCATTCCTTTGTTTTAAAAGACGATCTTGGTTATGTTTGTCGAGTTTGTGGAATCATTGGCAAAGGAATTGACACCATATTTGAGTTCCAGTATGCTAAGGTTAAGAGGAATACAAGAACTTACATGGCTGATTCTTGGAGTACCAAAGAAGGTGCAAAGTCTGATGTACCTGGATATAAAATCACTGAAGATGATCTGTTTGTAACTGAAATTTCTGCCCACCCTAGGCATATGAAGCAAATGAAACCACATCAAGTAGAAGGATTCAACTTTCTTGTCAGCAACCTTGTGGGTGACAATCCCGGGGGCTGCATTTTGGCGCATGCTCCAGGATCTGGGAAGACATTCATGATAATCAGTTTCATGCAAAGTTTCCTAGCGAAATATCCTAATGCTAGACCACTTGTGGTGCTTCCTAAAGGGATACTGGCAATTTGGAAAAAGGAGTTTCAGATATGGCAAGTGGAGGACTTACCGCTCTATGACTTTTATACTGTGAAAGCGGACAGTAGATCTCAGCAACTAGAGGTGCTGAAACAGTGGGTGGCGCAGAAGAGTATCCTTTTCCTTGGGTACAAACAGTTTTCTTCAATTGTCTGTGATTGTGGAACTAACACCACATCAGTAACTTGCCAAGAGATATTGCTCAAGGCTCCTTCAATTCTCATTTTGGACGAGGGACACACTCCAAGGAATGAGAATACTGATGTCTTACAATCACTTGCGAAAGTACAAACTCCCAGAAAGGTAGTATTGTCTGGGACTCTTTATCAGAACCATGTGAAGGAGGTCTTTAATATTTTGAATCTTGTGCGTCCAAAGTTCTTAAGGCTAGAAAATTCTCGAGGTATTGTCAAGCGAATTATGAGTAGAGTAAATATACCAGCTGTGAGAAAACAGTTTAAAGCAGGTGGAGATACAGTTTTCTACGACTTGGTTGAGCACACTTTGCAGAAGGACCTAGATTTTAAAAGGAAAGTTGCAGTCATACAAGATTTGCGTGAAATGACCAGCAATGTACTTCACTACTATAAAGGAGATTTCCTTGATGAGCTTCCCGGTCTAGTTGATTTCACTGTGGTACTCAATCTTACCTCTAGACAGAAGCATGAAGCTGACAAATTAAAGAAGCTATCCAGAAAGTTTAAGATAAGTTCTGTAGGAAGTGCTGTTTATCTTCACCCTAAGCTAAAACCCATCTCAGAAAATCTTGCTGAAAGTTCTACTGTAACTGATTATATGGTGGATGAAATGCTAGAAAGGTTAGATGTGAAAGATGGAGTGAAGACAAAGTTTTTTCTCAATATGCTAAACTTATGCGAGTCAAGTGGGGAGAAGCTTCTGCTTTTCAGCCAATATCTCCTACCTCTGAAATTCTTAGAAAGATTAGCTGCGAAAAAGAAGGGCTGGGCCCTTGGAAGAGAAGTCTTTGTCATCTCGGGAGAATCAACCCCTGAACAAAGGGAGTGGTCAATGGAACGATTTAACAATTCACCTGATGCCAGAGTCTTCTTTGGCTCCATCAAGGCATGTGGGGAGGGCATATCTTTGGTGGGGGCATCCCGCATAATAATTTTGGATGTCCACCTTAATCCCTCAGTTACTCGCCAAGCAATTGGCCGTGCATTCCGGCCAGGTCAAAAGAAGAAGGTATTTGCATATCGATTGGTTGCTGCTGATTCTCCAGAAGATGAAGATCACCATACTTGTTTCAGGAAGGAATTAATTTCTAGGATGTGGTTTGAATGGAATGAGTATTGTGGTTATCGTGATTTTGATGTTGAGACAGTTGATGTAAAAGAATGTGGTGATCTCTTTCTGGAAAGTCCATTCTTAAGGGAAGATGTAAAAGTTCTGTATAAAAGGTAGACCTTGGTATTCAAGAAAGTTTGCACATAGTTGGCGCATGTGTTTTGTTGTTATCTAACTGCACAGTTTAATGCTCATTTGGTTCAAAAGGATGTTAGATTTTTTGGTGCCGAAGAAAAAAATTAAGTGACCTGTCTGAATTTGTAGTATTAAGGGACAGTCATGTAGCATCATTCTTCCTAACTTCTTTTGAGGTAATGTTGTATAACATGCTCATTTGGTCACAGCTATCTCTCTTTCTATCACTCTCGCTTGCTAAGACTGCGATTGATTGGCTTC 3112 0.4078 MEPAVDILPTKRLNPSGLYPEGNKRLKLSSDGLSYSAHEYGKSELKEPKNSSNVVDYSDPLAIPHLMSRLNYGKFGSVTKEMQDILARRMQALSPYFAKYPRLLNILVEAGVNQKEEPDNAENQHAIGLARENVINLEEDSVANDVPAASLPIVIIDSDEEDDGNQKHVLPFQEVTLTKTVEQFPGMAIAEYHHPIAYHAESKARKFETSLATEDKASRDRGVYVGVEENQLANAIDDGLDDIWREMSMSLECSKDVAMDPLPEEDEEEEEEEEKRGVEDKPGGDCDHSFVLKDDLGYVCRVCGIIGKGIDTIFEFQYAKVKRNTRTYMADSWSTKEGAKSDVPGYKITEDDLFVTEISAHPRHMKQMKPHQVEGFNFLVSNLVGDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPNARPLVVLPKGILAIWKKEFQIWQVEDLPLYDFYTVKADSRSQQLEVLKQWVAQKSILFLGYKQFSSIVCDCGTNTTSVTCQEILLKAPSILILDEGHTPRNENTDVLQSLAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLRLENSRGIVKRIMSRVNIPAVRKQFKAGGDTVFYDLVEHTLQKDLDFKRKVAVIQDLREMTSNVLHYYKGDFLDELPGLVDFTVVLNLTSRQKHEADKLKKLSRKFKISSVGSAVYLHPKLKPISENLAESSTVTDYMVDEMLERLDVKDGVKTKFFLNMLNLCESSGEKLLLFSQYLLPLKFLERLAAKKKGWALGREVFVISGESTPEQREWSMERFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQKKKVFAYRLVAADSPEDEDHHTCFRKELISRMWFEWNEYCGYRDFDVETVDVKECGDLFLESPFLREDVKVLYKR 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach7g01527 909 MobiDBLite consensus disorder prediction 255 284 - -
Bach7g01527 909 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 506 871 IPR027417 -
Bach7g01527 909 Gene3D - 339 588 IPR038718 -
Bach7g01527 909 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 563 IPR027417 -
Bach7g01527 909 SMART ultradead3 364 568 IPR014001 -
Bach7g01527 909 Pfam Helicase conserved C-terminal domain 720 832 IPR001650 -
Bach7g01527 909 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 231 908 IPR044567 GO:0080188
Bach7g01527 909 Pfam SNF2-related domain 388 565 IPR000330 GO:0005524|GO:0140658
Bach7g01527 909 MobiDBLite consensus disorder prediction 261 275 - -
Bach7g01527 909 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 701 882 IPR001650 -
Bach7g01527 909 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 382 561 IPR014001 -
Bach7g01527 909 Gene3D - 640 891 IPR027417 -
Bach7g01527 909 SMART helicmild6 745 833 IPR001650 -
Bach7g01527 909 CDD SF2_C_SNF 716 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach7g01527 Bach-Chr7 24714573 24719754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach7g01527 684 861 RAD5 or RAD16-like Gene Family AT5G43530 29.348 4.50e-14 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach7g01527 SNF2_N 8.9e-20 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach7g01527 K10875 - qsa:O6P43_011561 1286.94